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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri64220
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri64220
Phaeodactylum tricornutum
0.0e+00
3428.6
1781
100.0
ps00G171940
Pseudo-nitzschia multiseries
0.0e+00
1098.6
1812
41.1
Sro635_g179140
Seminavis robusta
1.5e-307
1057.7
1941
40.3
sya00G106840
Synedra acus
8.9e-255
882.5
1862
36.0
fso16160
Fistulifera solaris
4.3e-249
863.6
1459
42.7
fso117840
Fistulifera solaris
3.6e-248
860.5
1458
43.3
CC00G148520
Cyclotella cryptica
9.3e-220
766.1
1595
36.1
tho42080
Thalassiosira oceanica
3.4e-182
641.3
1447
33.0
PSNMU-V1.4_AUG-EV-PASAV3_0001730
Pseudo-nitzschia multistriata
2.3e-178
628.6
873
44.4
gene14810
Fragilariopsis cylindrus
4.9e-144
514.6
378
67.2
PSNMU-V1.4_AUG-EV-PASAV3_0001720
Pseudo-nitzschia multistriata
3.6e-115
418.7
523
44.9
tps168090
Thalassiosira pseudonana
2.1e-110
402.9
365
54.0
Naga_100262g3
Nannochloropsis gaditana
9.9e-97
357.5
1796
25.6
FBgn0035227
Drosophila melanogaster
4.0e-53
212.6
381
33.3
Ec-06_001040
Ectocarpus siliculosus
5.9e-49
198.7
350
34.3
ENSG00000100150
Homo sapiens
6.5e-48
195.3
1114
24.1
emh311680
Emiliania huxleyi
1.1e-39
167.9
454
29.3
gene14811
Fragilariopsis cylindrus
2.0e-36
157.1
203
42.4
WBGene00011604
Caenorhabditis elegans
4.4e-36
156.0
377
30.0
gsu101930
Galdieria sulphuraria
2.0e-33
147.1
382
27.5
gsu101950
Galdieria sulphuraria
2.0e-33
147.1
382
27.5
SPBC26H8.04c
Schizosaccharomyces pombe
2.6e-28
130.2
1150
22.2
YJR138W
Saccharomyces cerevisiae strain S288C
2.6e-20
103.6
1156
21.0
pte473990
Paramecium tetraurelia
8.1e-14
82.0
397
21.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing