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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri53350
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri53350
Phaeodactylum tricornutum
0.0e+00
1273.5
635
100.0
fso05670
Fistulifera solaris
8.7e-112
406.0
531
40.7
fso55100
Fistulifera solaris
8.7e-112
406.0
539
41.4
fso05610
Fistulifera solaris
4.8e-102
373.6
548
40.9
fso55160
Fistulifera solaris
1.1e-101
372.5
537
41.2
fso192300
Fistulifera solaris
5.3e-93
343.6
530
38.1
sya00G73700
Synedra acus
2.6e-92
341.3
537
37.8
fso150710
Fistulifera solaris
3.9e-88
327.4
560
36.6
ptri33350
Phaeodactylum tricornutum
1.6e-86
322.0
629
36.2
PSNMU-V1.4_AUG-EV-PASAV3_0005430
Pseudo-nitzschia multistriata
1.9e-74
282.0
591
33.0
Sro93_g048600
Seminavis robusta
3.0e-64
248.1
543
33.0
sya00G136470
Synedra acus
1.7e-59
232.3
415
34.0
gene13284
Fragilariopsis cylindrus
1.8e-56
222.2
462
32.9
sya00G235620
Synedra acus
1.8e-48
195.7
511
28.2
sya00G231010
Synedra acus
2.3e-48
195.3
511
28.4
sya00G129820
Synedra acus
5.2e-48
194.1
515
28.0
sya00G136490
Synedra acus
1.1e-45
186.4
399
32.6
ps00G114460
Pseudo-nitzschia multiseries
1.9e-42
175.6
520
28.7
ptri26850
Phaeodactylum tricornutum
1.6e-41
172.6
229
42.4
CC00G70050
Cyclotella cryptica
3.6e-41
171.4
545
27.7
sya00G152200
Synedra acus
5.2e-40
167.5
487
27.3
Sro1331_g263520
Seminavis robusta
7.5e-39
163.7
352
30.7
ps00G149460
Pseudo-nitzschia multiseries
2.5e-18
95.5
112
45.5
Naga_100045g3
Nannochloropsis gaditana
4.0e-16
88.2
242
27.3
Naga_100091g15
Nannochloropsis gaditana
1.5e-15
86.3
241
26.1
tps118860
Thalassiosira pseudonana
6.6e-11
70.9
169
32.5
tho126280
Thalassiosira oceanica
6.9e-08
60.8
168
28.6
tho487420
Thalassiosira oceanica
9.9e-07
57.0
195
27.2
CC00G47570
Cyclotella cryptica
1.3e-06
56.6
168
27.4
tps156180
Thalassiosira pseudonana
1.7e-06
56.2
174
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (7 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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