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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri47850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri47850
Phaeodactylum tricornutum
2.4e-292
1005.4
477
100.0
ps00G57480
Pseudo-nitzschia multiseries
4.8e-163
575.9
468
61.3
fso49480
Fistulifera solaris
2.9e-160
566.6
456
62.7
fso27200
Fistulifera solaris
2.4e-159
563.5
456
61.8
Sro2261_g321150
Seminavis robusta
7.1e-159
562.0
467
59.7
CC00G95020
Cyclotella cryptica
2.3e-141
503.8
518
50.4
CC00G133790
Cyclotella cryptica
5.0e-136
486.1
458
51.5
sya00G64440
Synedra acus
2.0e-132
474.2
433
55.7
PSNMU-V1.4_AUG-EV-PASAV3_0062170
Pseudo-nitzschia multistriata
5.9e-129
462.6
442
55.2
CC00G79370
Cyclotella cryptica
1.1e-122
441.8
501
48.3
tps73080
Thalassiosira pseudonana
9.4e-119
428.7
470
47.4
gene3451
Fragilariopsis cylindrus
2.0e-113
411.0
278
68.7
sya00G172000
Synedra acus
1.9e-111
404.4
457
47.5
tps212020
Thalassiosira pseudonana
1.3e-96
355.1
278
60.4
gene7251
Fragilariopsis cylindrus
7.8e-89
329.3
276
59.4
Cre13.g565600
Chlamydomonas reinhardtii
8.0e-78
292.7
428
39.7
ptri205380
Phaeodactylum tricornutum
3.2e-74
280.8
432
40.3
AA0001G01220
Aureococcus anophagefferens
8.1e-70
266.2
416
39.7
sya00G228240
Synedra acus
2.0e-60
235.0
344
39.0
tho21620
Thalassiosira oceanica
9.9e-44
179.5
484
30.4
emh29350
Emiliania huxleyi
1.3e-35
152.5
200
41.5
pte501940
Paramecium tetraurelia
6.9e-13
77.0
223
27.4
WBGene00017136
Caenorhabditis elegans
1.5e-12
75.9
183
24.6
pte577730
Paramecium tetraurelia
1.0e-11
73.2
150
29.3
Ec-11_006110
Ectocarpus siliculosus
1.7e-11
72.4
329
26.7
pte157800
Paramecium tetraurelia
2.9e-11
71.6
354
24.3
AA0024G00200
Aureococcus anophagefferens
3.8e-11
71.2
248
27.0
pte428270
Paramecium tetraurelia
6.5e-11
70.5
227
23.8
AA0020G01370
Aureococcus anophagefferens
8.5e-11
70.1
199
28.6
ENSG00000146856
Homo sapiens
1.1e-10
69.7
323
23.5
pte650870
Paramecium tetraurelia
1.9e-10
68.9
151
29.1
pte674870
Paramecium tetraurelia
1.9e-10
68.9
174
27.6
emh712530
Emiliania huxleyi
2.5e-10
68.6
112
34.8
WBGene00018995
Caenorhabditis elegans
3.2e-10
68.2
192
24.5
ENSG00000166748
Homo sapiens
4.2e-10
67.8
239
25.9
Ec-00_007300
Ectocarpus siliculosus
7.2e-10
67.0
167
26.3
Cre13.g572850
Chlamydomonas reinhardtii
1.2e-09
66.2
213
26.3
pte418310
Paramecium tetraurelia
1.6e-09
65.9
186
24.7
pte707100
Paramecium tetraurelia
1.6e-09
65.9
177
26.6
pte413720
Paramecium tetraurelia
2.1e-09
65.5
120
30.0
pte465700
Paramecium tetraurelia
2.1e-09
65.5
151
28.5
pte779620
Paramecium tetraurelia
2.1e-09
65.5
298
24.2
pte84580
Paramecium tetraurelia
2.7e-09
65.1
175
27.4
pte512960
Paramecium tetraurelia
2.7e-09
65.1
213
26.3
Ec-14_002450
Ectocarpus siliculosus
3.6e-09
64.7
134
31.3
pte408580
Paramecium tetraurelia
3.6e-09
64.7
155
29.7
ENSG00000084693
Homo sapiens
4.7e-09
64.3
102
35.3
pte218490
Paramecium tetraurelia
6.1e-09
63.9
183
26.8
pte449010
Paramecium tetraurelia
7.9e-09
63.5
156
28.8
ENSG00000135049
Homo sapiens
1.0e-08
63.2
227
28.2
ENSG00000165923
Homo sapiens
1.4e-08
62.8
323
22.9
pte722760
Paramecium tetraurelia
1.4e-08
62.8
295
23.4
pte168410
Paramecium tetraurelia
1.8e-08
62.4
224
22.3
pte267230
Paramecium tetraurelia
3.0e-08
61.6
146
27.4
Cre12.g528100
Chlamydomonas reinhardtii
3.9e-08
61.2
128
32.0
pte187620
Paramecium tetraurelia
1.5e-07
59.3
146
26.7
pte436800
Paramecium tetraurelia
2.0e-07
58.9
144
29.9
pte81420
Paramecium tetraurelia
2.6e-07
58.5
112
32.1
pte288460
Paramecium tetraurelia
2.6e-07
58.5
336
21.7
FBgn0051019
Drosophila melanogaster
4.4e-07
57.8
313
20.4
FBgn0265726
Drosophila melanogaster
3.7e-06
54.7
149
25.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (23 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing