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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri47630
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri47630
Phaeodactylum tricornutum
8.4e-272
937.2
493
100.0
ptri235830
Phaeodactylum tricornutum
4.0e-104
380.2
185
100.0
sya00G268550
Synedra acus
3.7e-70
267.3
263
55.1
sya00G198400
Synedra acus
4.9e-70
266.9
231
60.6
PSNMU-V1.4_AUG-EV-PASAV3_0088620
Pseudo-nitzschia multistriata
4.1e-69
263.8
231
58.0
sya00G45860
Synedra acus
4.1e-69
263.8
231
60.2
Sro624_g177390
Seminavis robusta
1.5e-63
245.4
189
62.4
fso97000
Fistulifera solaris
2.9e-54
214.5
237
50.6
Sro32_g020930
Seminavis robusta
1.6e-52
208.8
189
56.6
gene14950
Fragilariopsis cylindrus
7.8e-52
206.5
157
62.4
CC00G196600
Cyclotella cryptica
4.8e-49
197.2
210
49.0
tho513220
Thalassiosira oceanica
5.3e-48
193.7
175
52.6
tps215230
Thalassiosira pseudonana
2.1e-33
145.2
166
45.2
ps00G09600
Pseudo-nitzschia multiseries
2.9e-30
134.8
136
47.8
CC00G161610
Cyclotella cryptica
1.9e-26
122.1
276
31.2
tho242740
Thalassiosira oceanica
2.4e-24
115.2
292
30.1
YML032C
Saccharomyces cerevisiae strain S288C
4.5e-15
84.3
220
29.5
SPBC119.14
Schizosaccharomyces pombe
1.0e-14
83.2
242
27.3
CM19G03680
Cyanidioschyzon merolae
2.5e-13
78.6
137
35.0
ENSG00000002016
Homo sapiens
1.0e-11
73.2
145
32.4
SPAC30D11.10
Schizosaccharomyces pombe
1.4e-11
72.8
119
33.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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