Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri36030
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri36030
Phaeodactylum tricornutum
0.0e+00
1108.2
560
100.0
Sro1292_g260010
Seminavis robusta
2.5e-264
912.5
541
83.0
sya00G04340
Synedra acus
5.4e-259
894.8
543
81.8
fso18480
Fistulifera solaris
3.0e-257
889.0
554
80.5
fso141370
Fistulifera solaris
7.3e-256
884.4
554
80.1
gene20422
Fragilariopsis cylindrus
1.6e-255
883.2
555
78.6
ps00G81850
Pseudo-nitzschia multiseries
1.1e-254
880.6
541
79.1
CC00G190490
Cyclotella cryptica
4.9e-244
845.1
541
77.3
tps21890
Thalassiosira pseudonana
3.9e-241
835.5
546
74.9
tho172380
Thalassiosira oceanica
7.6e-237
821.2
543
73.7
PSNMU-V1.4_AUG-EV-PASAV3_0068330
Pseudo-nitzschia multistriata
1.6e-234
813.5
490
81.6
Ec-19_000630
Ectocarpus siliculosus
2.4e-166
587.0
585
53.0
WBGene00004373
Caenorhabditis elegans
6.0e-141
502.7
549
47.9
ENSG00000024422
Homo sapiens
4.3e-139
496.5
540
48.5
emh259990
Emiliania huxleyi
2.4e-137
490.7
555
47.0
FBgn0016693
Drosophila melanogaster
4.5e-136
486.5
532
47.9
ENSG00000103966
Homo sapiens
5.8e-136
486.1
534
48.5
ENSG00000013016
Homo sapiens
2.3e-132
474.2
521
48.0
ENSG00000110047
Homo sapiens
5.6e-131
469.5
525
47.0
Ec-12_000940
Ectocarpus siliculosus
6.7e-124
446.0
374
57.5
CC00G179960
Cyclotella cryptica
1.2e-117
425.2
399
54.1
AA0019G01310
Aureococcus anophagefferens
4.6e-117
423.3
398
54.0
sya00G15560
Synedra acus
6.1e-117
422.9
374
55.9
ps00G75430
Pseudo-nitzschia multiseries
1.3e-116
421.8
388
54.6
tho381880
Thalassiosira oceanica
2.3e-116
421.0
396
54.0
tps132920
Thalassiosira pseudonana
8.7e-116
419.1
374
56.1
ptri234790
Phaeodactylum tricornutum
2.5e-115
417.5
374
54.3
fso42090
Fistulifera solaris
1.3e-114
415.2
373
54.4
fso196360
Fistulifera solaris
1.3e-114
415.2
373
54.4
AT4G05520
Arabidopsis thaliana
3.7e-114
413.7
384
53.1
Pp3c24_13930
Physcomitrella patens
8.2e-114
412.5
377
53.3
AT3G20290
Arabidopsis thaliana
1.1e-113
412.1
404
51.7
Cre06.g260950
Chlamydomonas reinhardtii
1.1e-113
412.1
377
53.6
gene1534
Fragilariopsis cylindrus
3.1e-113
410.6
379
53.3
Sro411_g137660
Seminavis robusta
2.1e-109
397.9
375
53.1
Naga_100005g103
Nannochloropsis gaditana
1.4e-108
395.2
360
53.9
emh719880
Emiliania huxleyi
9.7e-107
389.0
605
37.9
ccr39140
Chondrus crispus
1.3e-106
388.7
532
43.4
tps175320
Thalassiosira pseudonana
2.3e-100
367.9
385
48.6
Ec-22_001020
Ectocarpus siliculosus
3.8e-95
350.5
377
44.6
CC00G70130
Cyclotella cryptica
1.5e-94
348.6
453
43.0
tho44380
Thalassiosira oceanica
8.0e-93
342.8
436
42.2
emh656290
Emiliania huxleyi
1.8e-92
341.7
434
42.4
emh349360
Emiliania huxleyi
1.8e-92
341.7
434
42.4
Pp3c20_2350
Physcomitrella patens
4.1e-89
330.5
278
57.6
AA0025G01100
Aureococcus anophagefferens
7.0e-89
329.7
385
43.9
AA0008G01740
Aureococcus anophagefferens
8.0e-77
289.7
381
42.3
Ec-19_004280
Ectocarpus siliculosus
2.0e-72
275.0
321
43.0
AA0005G01230
Aureococcus anophagefferens
6.1e-69
263.5
445
36.0
AA0026G00630
Aureococcus anophagefferens
2.0e-67
258.5
386
38.6
PSNMU-V1.4_AUG-EV-PASAV3_0029850
Pseudo-nitzschia multistriata
6.4e-58
226.9
210
54.3
Naga_101589g1
Nannochloropsis gaditana
2.0e-51
205.3
135
68.9
FBgn0038181
Drosophila melanogaster
3.4e-43
177.9
401
29.4
emh02900
Emiliania huxleyi
5.8e-43
177.2
136
59.6
Naga_100486g6
Nannochloropsis gaditana
2.3e-31
138.7
102
65.7
ptri71840
Phaeodactylum tricornutum
8.7e-31
136.7
209
37.3
fso198580
Fistulifera solaris
1.5e-30
136.0
264
34.5
Ec-12_007360
Ectocarpus siliculosus
4.3e-30
134.4
216
35.6
fso20780
Fistulifera solaris
7.3e-30
133.7
264
34.1
ps00G194570
Pseudo-nitzschia multiseries
1.6e-29
132.5
203
36.9
gene13921
Fragilariopsis cylindrus
2.8e-29
131.7
204
36.8
AA0737G00010
Aureococcus anophagefferens
1.8e-28
129.0
233
34.3
PSNMU-V1.4_AUG-EV-PASAV3_0058340
Pseudo-nitzschia multistriata
4.0e-28
127.9
281
31.3
CC00G103780
Cyclotella cryptica
9.0e-28
126.7
253
32.8
tps51750
Thalassiosira pseudonana
2.6e-27
125.2
220
34.1
Naga_100886g1
Nannochloropsis gaditana
9.9e-27
123.2
134
46.3
Naga_100010g73
Nannochloropsis gaditana
1.2e-24
116.3
222
32.0
tho327680
Thalassiosira oceanica
3.0e-23
111.7
237
31.6
Sro70_g038840
Seminavis robusta
1.3e-21
106.3
186
36.0
tho572580
Thalassiosira oceanica
1.5e-19
99.4
84
53.6
ENSG00000127527
Homo sapiens
4.3e-14
81.3
98
45.9
ENSG00000085832
Homo sapiens
7.4e-14
80.5
81
46.9
sya00G196460
Synedra acus
2.8e-13
78.6
134
35.8
FBgn0023388
Drosophila melanogaster
3.1e-12
75.1
109
40.4
SPBC11G11.02c
Schizosaccharomyces pombe
4.0e-12
74.7
110
33.6
Cre12.g557250
Chlamydomonas reinhardtii
7.6e-11
70.5
186
28.0
Ec-05_003780
Ectocarpus siliculosus
3.8e-10
68.2
84
39.3
ENSG00000205726
Homo sapiens
3.8e-10
68.2
73
45.2
WBGene00001224
Caenorhabditis elegans
2.5e-09
65.5
80
45.0
Ec-26_001740
Ectocarpus siliculosus
5.5e-09
64.3
97
36.1
gsu65820
Galdieria sulphuraria
1.2e-08
63.2
149
28.2
FBgn0035060
Drosophila melanogaster
1.0e-07
60.1
78
46.2
ENSG00000198399
Homo sapiens
1.0e-07
60.1
78
39.7
YIR006C
Saccharomyces cerevisiae strain S288C
6.7e-07
57.4
133
29.3
Ec-04_003870
Ectocarpus siliculosus
1.5e-06
56.2
68
39.7
Ec-10_001340
Ectocarpus siliculosus
1.9e-06
55.8
69
37.7
WBGene00006405
Caenorhabditis elegans
2.5e-06
55.5
72
44.4
AA0019G00320
Aureococcus anophagefferens
4.3e-06
54.7
107
33.6
Naga_100187g11
Nannochloropsis gaditana
5.7e-06
54.3
67
32.8
ENSG00000135597
Homo sapiens
7.4e-06
53.9
111
28.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (7 genes)
Ectocarpus siliculosus (9 genes)
Nannochloropsis gaditana (6 genes)
Homo sapiens (9 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing