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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri26850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri26850
Phaeodactylum tricornutum
6.2e-149
528.1
260
100.0
fso150710
Fistulifera solaris
1.6e-43
177.9
248
40.7
ptri53350
Phaeodactylum tricornutum
1.3e-42
174.9
229
42.4
fso192300
Fistulifera solaris
6.6e-42
172.6
245
39.6
ptri33350
Phaeodactylum tricornutum
2.4e-39
164.1
245
39.2
fso55100
Fistulifera solaris
7.6e-38
159.1
245
34.7
fso05670
Fistulifera solaris
2.2e-37
157.5
246
34.1
fso05610
Fistulifera solaris
1.9e-36
154.5
243
37.9
fso55160
Fistulifera solaris
1.9e-36
154.5
244
38.1
PSNMU-V1.4_AUG-EV-PASAV3_0005430
Pseudo-nitzschia multistriata
2.4e-36
154.1
244
37.7
sya00G73700
Synedra acus
1.6e-35
151.4
246
37.0
Sro1331_g263520
Seminavis robusta
1.3e-26
121.7
253
31.6
gene13284
Fragilariopsis cylindrus
3.3e-25
117.1
239
33.1
Sro93_g048600
Seminavis robusta
7.3e-25
115.9
242
33.1
sya00G136490
Synedra acus
4.9e-21
103.2
238
29.0
sya00G136470
Synedra acus
6.4e-21
102.8
238
29.0
sya00G152200
Synedra acus
1.4e-20
101.7
248
29.8
CC00G70050
Cyclotella cryptica
1.5e-14
81.6
238
27.3
sya00G231010
Synedra acus
1.5e-14
81.6
240
27.9
sya00G129820
Synedra acus
2.0e-14
81.3
252
27.8
sya00G235620
Synedra acus
2.6e-14
80.9
244
27.5
ps00G114460
Pseudo-nitzschia multiseries
2.9e-13
77.4
241
26.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (7 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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