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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri207540
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri207540
Phaeodactylum tricornutum
4.3e-306
1051.2
532
100.0
fso43860
Fistulifera solaris
2.3e-102
374.4
461
45.6
fso64850
Fistulifera solaris
2.0e-101
371.3
523
42.6
Sro556_g165920
Seminavis robusta
4.1e-99
363.6
553
43.4
sya00G252680
Synedra acus
1.5e-88
328.6
485
39.6
ps00G173860
Pseudo-nitzschia multiseries
2.7e-74
281.2
515
38.8
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
4.5e-69
263.8
581
35.5
ENSG00000101751
Homo sapiens
1.8e-22
109.0
251
31.9
ccr169420
Chondrus crispus
2.0e-21
105.5
404
25.7
gsu33630
Galdieria sulphuraria
2.0e-21
105.5
340
27.6
emh530300
Emiliania huxleyi
8.5e-20
100.1
249
29.7
emh67860
Emiliania huxleyi
8.5e-20
100.1
249
29.7
Ec-01_006080
Ectocarpus siliculosus
4.2e-19
97.8
276
26.4
gsu71910
Galdieria sulphuraria
6.8e-17
90.5
280
23.6
CM01G00620
Cyanidioschyzon merolae
5.7e-16
87.4
261
29.5
Pp3c14_23660
Physcomitrella patens
4.8e-15
84.3
277
24.5
emh117440
Emiliania huxleyi
6.3e-15
84.0
88
44.3
Cre03.g148050
Chlamydomonas reinhardtii
2.4e-14
82.0
116
37.9
FBgn0037141
Drosophila melanogaster
5.4e-14
80.9
272
26.1
AT5G44740
Arabidopsis thaliana
7.0e-14
80.5
278
26.3
FBgn0037554
Drosophila melanogaster
7.0e-14
80.5
254
26.4
SPCC553.07c
Schizosaccharomyces pombe
9.1e-14
80.1
258
26.0
CM13G02840
Cyanidioschyzon merolae
5.9e-13
77.4
246
25.2
pte497140
Paramecium tetraurelia
1.0e-12
76.6
258
23.3
AA0002G04000
Aureococcus anophagefferens
1.3e-12
76.3
212
27.8
Pp3c8_17250
Physcomitrella patens
1.3e-12
76.3
278
26.6
emh540590
Emiliania huxleyi
6.6e-12
73.9
281
26.0
ENSG00000170734
Homo sapiens
2.5e-11
72.0
264
24.2
ENSG00000122008
Homo sapiens
5.5e-11
70.9
284
23.9
ptri209620
Phaeodactylum tricornutum
9.5e-11
70.1
275
29.1
AT1G49980
Arabidopsis thaliana
2.1e-10
68.9
259
23.9
emh725060
Emiliania huxleyi
3.6e-10
68.2
251
25.1
WBGene00018721
Caenorhabditis elegans
8.0e-10
67.0
271
25.5
emh81660
Emiliania huxleyi
1.4e-09
66.2
333
22.5
pte538790
Paramecium tetraurelia
1.8e-09
65.9
246
24.4
pte531460
Paramecium tetraurelia
2.3e-09
65.5
246
23.2
ptri167230
Phaeodactylum tricornutum
3.0e-09
65.1
338
20.7
pte645160
Paramecium tetraurelia
4.0e-09
64.7
253
20.2
tho187600
Thalassiosira oceanica
2.6e-08
62.0
286
24.5
SPBC16A3.11
Schizosaccharomyces pombe
4.4e-08
61.2
248
27.4
emh225200
Emiliania huxleyi
5.7e-08
60.8
253
24.5
emh135140
Emiliania huxleyi
5.7e-08
60.8
257
23.7
Ec-17_000370
Ectocarpus siliculosus
7.5e-08
60.5
212
27.4
gsu07230
Galdieria sulphuraria
7.5e-08
60.5
120
33.3
Cre07.g338602
Chlamydomonas reinhardtii
1.7e-07
59.3
67
40.3
Sro492_g153880
Seminavis robusta
2.2e-07
58.9
452
20.1
ptri32900
Phaeodactylum tricornutum
1.1e-06
56.6
290
24.5
ccr06940
Chondrus crispus
1.8e-06
55.8
252
22.2
YDR419W
Saccharomyces cerevisiae strain S288C
9.2e-06
53.5
268
22.0
tps207050
Thalassiosira pseudonana
9.2e-06
53.5
60
43.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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