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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri183750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri183750
Phaeodactylum tricornutum
2.2e-129
463.0
234
100.0
Sro200_g084650
Seminavis robusta
1.0e-70
268.1
232
58.6
fso82230
Fistulifera solaris
9.1e-67
255.0
226
55.8
ps00G03320
Pseudo-nitzschia multiseries
1.5e-64
247.7
225
56.0
gene12109
Fragilariopsis cylindrus
2.0e-61
237.3
220
57.3
sya00G210140
Synedra acus
5.7e-61
235.7
216
58.3
CC00G208140
Cyclotella cryptica
6.8e-54
212.2
232
50.9
tps199990
Thalassiosira pseudonana
7.5e-53
208.8
215
52.1
tho560660
Thalassiosira oceanica
1.6e-47
191.0
198
52.0
Ec-18_001300
Ectocarpus siliculosus
3.1e-38
160.2
236
43.6
AA0006G02440
Aureococcus anophagefferens
3.2e-35
150.2
221
43.4
Ec-23_001230
Ectocarpus siliculosus
2.5e-32
140.6
215
41.4
Pp3c3_18340
Physcomitrella patens
7.6e-29
129.0
234
38.9
Pp3c4_10100
Physcomitrella patens
9.9e-29
128.6
231
38.1
Cre10.g419800
Chlamydomonas reinhardtii
6.6e-25
115.9
166
44.0
AT4G38570
Arabidopsis thaliana
7.3e-24
112.5
231
37.7
Naga_100199g9
Nannochloropsis gaditana
2.1e-23
110.9
233
36.9
YPR113W
Saccharomyces cerevisiae strain S288C
4.0e-22
106.7
227
33.9
gsu34330
Galdieria sulphuraria
5.2e-22
106.3
216
35.6
AT1G68000
Arabidopsis thaliana
6.8e-22
105.9
232
35.3
SPAC1D4.08
Schizosaccharomyces pombe
4.9e-20
99.8
243
32.5
gsu34350
Galdieria sulphuraria
3.5e-18
93.6
216
33.8
pte528690
Paramecium tetraurelia
5.1e-17
89.7
218
33.9
FBgn0030670
Drosophila melanogaster
1.9e-16
87.8
218
32.6
pte541840
Paramecium tetraurelia
2.5e-16
87.4
206
35.0
WBGene00012897
Caenorhabditis elegans
7.3e-16
85.9
224
30.4
ccr148780
Chondrus crispus
9.6e-16
85.5
221
35.3
emh607770
Emiliania huxleyi
6.2e-15
82.8
235
34.5
CM13G01250
Cyanidioschyzon merolae
7.1e-11
69.3
224
33.5
ENSG00000103502
Homo sapiens
6.6e-09
62.8
165
32.7
ptri228170
Phaeodactylum tricornutum
1.1e-06
55.5
133
33.8
tps90000
Thalassiosira pseudonana
5.3e-06
53.1
78
42.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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