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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri12710
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri12710
Phaeodactylum tricornutum
2.5e-222
772.7
457
100.0
fso164560
Fistulifera solaris
1.7e-80
301.6
212
74.5
fso122470
Fistulifera solaris
2.2e-80
301.2
212
74.5
Sro752_g197220
Seminavis robusta
1.8e-66
255.0
199
67.3
Sro752_g197240
Seminavis robusta
1.7e-64
248.4
304
51.6
Sro2907_g340020
Seminavis robusta
4.7e-51
203.8
199
54.8
sya00G00850
Synedra acus
2.9e-48
194.5
195
50.8
sya00G02400
Synedra acus
2.9e-48
194.5
195
50.3
sya00G90600
Synedra acus
3.7e-48
194.1
239
48.5
sya00G48650
Synedra acus
1.1e-47
192.6
189
52.4
sya00G00830
Synedra acus
1.9e-47
191.8
175
54.3
sya00G48750
Synedra acus
4.1e-47
190.7
195
50.8
sya00G130830
Synedra acus
4.1e-47
190.7
214
45.8
sya00G91260
Synedra acus
1.2e-46
189.1
195
50.3
sya00G250520
Synedra acus
1.2e-46
189.1
194
50.0
sya00G67300
Synedra acus
1.6e-46
188.7
198
48.5
sya00G168880
Synedra acus
2.0e-46
188.3
188
50.5
sya00G82080
Synedra acus
7.8e-46
186.4
222
43.2
sya00G48640
Synedra acus
1.7e-45
185.3
270
41.9
sya00G188530
Synedra acus
3.0e-45
184.5
195
48.2
fso125020
Fistulifera solaris
6.6e-45
183.3
169
58.0
sya00G183350
Synedra acus
6.6e-45
183.3
272
40.4
fso56920
Fistulifera solaris
1.1e-44
182.6
169
58.0
sya00G202730
Synedra acus
1.5e-44
182.2
232
45.3
sya00G250510
Synedra acus
1.9e-44
181.8
236
44.5
ps00G10110
Pseudo-nitzschia multiseries
3.3e-44
181.0
168
53.0
fso125000
Fistulifera solaris
2.1e-43
178.3
316
40.8
gene18540
Fragilariopsis cylindrus
3.6e-43
177.6
170
51.8
sya00G265590
Synedra acus
4.7e-43
177.2
195
46.2
PSNMU-V1.4_AUG-EV-PASAV3_0052330
Pseudo-nitzschia multistriata
6.2e-43
176.8
174
51.7
sya00G234810
Synedra acus
4.0e-42
174.1
208
44.2
sya00G234790
Synedra acus
1.2e-41
172.6
208
44.2
sya00G240240
Synedra acus
3.4e-41
171.0
256
41.0
sya00G172830
Synedra acus
4.4e-41
170.6
210
43.3
fso124850
Fistulifera solaris
2.9e-40
167.9
178
51.7
fso56900
Fistulifera solaris
1.2e-38
162.5
167
54.5
sya00G120410
Synedra acus
1.3e-37
159.1
208
43.3
sya00G234730
Synedra acus
3.9e-37
157.5
209
42.6
sya00G270400
Synedra acus
3.9e-37
157.5
208
43.8
sya00G00890
Synedra acus
3.6e-35
151.0
195
43.6
sya00G125000
Synedra acus
1.4e-34
149.1
153
49.7
sya00G48710
Synedra acus
2.3e-34
148.3
153
49.7
sya00G48910
Synedra acus
2.3e-34
148.3
153
49.7
Sro397_g134480
Seminavis robusta
3.1e-34
147.9
232
40.5
sya00G270430
Synedra acus
5.2e-34
147.1
192
44.8
gene11295
Fragilariopsis cylindrus
1.7e-32
142.1
169
46.7
gene17050
Fragilariopsis cylindrus
1.9e-31
138.7
167
44.9
ps00G55810
Pseudo-nitzschia multiseries
1.9e-31
138.7
176
44.9
fso140090
Fistulifera solaris
1.6e-30
135.6
174
43.1
PSNMU-V1.4_AUG-EV-PASAV3_0039860
Pseudo-nitzschia multistriata
2.1e-30
135.2
177
44.6
gene7226
Fragilariopsis cylindrus
1.0e-29
132.9
166
46.4
gene8232
Fragilariopsis cylindrus
1.3e-29
132.5
132
50.8
sya00G230070
Synedra acus
1.3e-29
132.5
179
39.7
ptri230810
Phaeodactylum tricornutum
2.3e-29
131.7
294
36.4
fso129880
Fistulifera solaris
6.6e-29
130.2
179
41.3
fso163030
Fistulifera solaris
1.1e-28
129.4
165
44.2
ps00G28660
Pseudo-nitzschia multiseries
4.3e-28
127.5
179
40.8
Ec-11_005660
Ectocarpus siliculosus
9.6e-28
126.3
162
43.2
ps00G135190
Pseudo-nitzschia multiseries
2.8e-27
124.8
181
40.3
PSNMU-V1.4_AUG-EV-PASAV3_0027480
Pseudo-nitzschia multistriata
6.8e-26
120.2
184
38.6
Sro610_g175190
Seminavis robusta
1.2e-25
119.4
178
39.9
sya00G197170
Synedra acus
7.1e-23
110.2
137
43.1
gene20036
Fragilariopsis cylindrus
9.3e-23
109.8
137
40.9
gene19259
Fragilariopsis cylindrus
1.6e-22
109.0
137
41.6
gene20596
Fragilariopsis cylindrus
2.3e-21
105.1
127
42.5
tps206670
Thalassiosira pseudonana
5.1e-21
104.0
125
44.0
CC00G121320
Cyclotella cryptica
5.6e-20
100.5
158
38.0
AA0004G03570
Aureococcus anophagefferens
1.5e-17
92.4
176
34.1
Naga_100003g87
Nannochloropsis gaditana
1.5e-17
92.4
187
33.7
gene8218
Fragilariopsis cylindrus
1.7e-16
89.0
83
54.2
sya00G48670
Synedra acus
2.2e-16
88.6
76
52.6
Sro2197_g318650
Seminavis robusta
1.9e-15
85.5
167
32.3
gene17404
Fragilariopsis cylindrus
2.4e-15
85.1
84
52.4
ptri103480
Phaeodactylum tricornutum
2.4e-15
85.1
115
42.6
ptri132230
Phaeodactylum tricornutum
2.7e-14
81.6
182
34.1
PSNMU-V1.4_AUG-EV-PASAV3_0047540
Pseudo-nitzschia multistriata
4.6e-14
80.9
161
34.8
Sro2137_g316050
Seminavis robusta
6.0e-14
80.5
207
30.0
fso101860
Fistulifera solaris
1.3e-13
79.3
182
35.2
ps00G180140
Pseudo-nitzschia multiseries
1.3e-13
79.3
230
30.0
fso192860
Fistulifera solaris
1.7e-13
79.0
182
35.2
tho63980
Thalassiosira oceanica
2.3e-13
78.6
114
37.7
ptri228630
Phaeodactylum tricornutum
1.1e-12
76.3
167
30.5
fso191540
Fistulifera solaris
2.1e-11
72.0
230
27.8
sya00G88380
Synedra acus
2.1e-11
72.0
110
34.5
WBGene00001972
Caenorhabditis elegans
2.8e-11
71.6
198
30.3
fso43290
Fistulifera solaris
2.8e-11
71.6
212
28.3
gene1457
Fragilariopsis cylindrus
2.4e-10
68.6
178
31.5
gene17974
Fragilariopsis cylindrus
4.0e-10
67.8
183
29.5
gene16574
Fragilariopsis cylindrus
6.9e-10
67.0
187
30.5
ENSG00000029993
Homo sapiens
1.2e-09
66.2
170
29.4
gene6233
Fragilariopsis cylindrus
1.5e-09
65.9
191
27.7
tho103280
Thalassiosira oceanica
1.5e-09
65.9
139
33.1
ENSG00000164104
Homo sapiens
3.4e-09
64.7
140
32.1
fso109830
Fistulifera solaris
5.8e-09
63.9
71
42.3
ps00G115260
Pseudo-nitzschia multiseries
9.9e-09
63.2
179
25.7
CC00G144190
Cyclotella cryptica
1.3e-08
62.8
185
26.5
ps00G39320
Pseudo-nitzschia multiseries
1.7e-08
62.4
161
32.3
ptri169820
Phaeodactylum tricornutum
1.7e-08
62.4
175
26.9
ENSG00000189403
Homo sapiens
2.9e-08
61.6
149
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0106300
Pseudo-nitzschia multistriata
2.9e-08
61.6
215
28.8
pte177310
Paramecium tetraurelia
2.4e-07
58.5
140
27.9
tho451040
Thalassiosira oceanica
3.2e-07
58.2
180
23.9
tho457600
Thalassiosira oceanica
3.2e-07
58.2
80
35.0
fso146930
Fistulifera solaris
4.2e-07
57.8
72
40.3
fso26710
Fistulifera solaris
5.5e-07
57.4
72
38.9
CC00G93660
Cyclotella cryptica
9.3e-07
56.6
185
28.1
YMR072W
Saccharomyces cerevisiae strain S288C
1.2e-06
56.2
143
25.2
pte219810
Paramecium tetraurelia
3.5e-06
54.7
151
29.1
tho40460
Thalassiosira oceanica
6.0e-06
53.9
81
38.3
CC00G143880
Cyclotella cryptica
7.9e-06
53.5
159
27.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (7 genes)
Fistulifera solaris (17 genes)
Fragilariopsis cylindrus (14 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (7 genes)
Synedra acus (34 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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