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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte725170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte725170
Paramecium tetraurelia
1.3e-165
583.9
342
100.0
pte791750
Paramecium tetraurelia
7.9e-160
564.7
342
96.5
pte777030
Paramecium tetraurelia
3.4e-131
469.5
342
81.0
pte617140
Paramecium tetraurelia
1.2e-123
444.5
342
78.4
AT1G47260
Arabidopsis thaliana
7.1e-36
152.9
234
35.0
AT1G19580
Arabidopsis thaliana
4.5e-30
133.7
234
33.3
ps00G145580
Pseudo-nitzschia multiseries
1.1e-23
112.5
221
32.6
gsu91670
Galdieria sulphuraria
2.4e-23
111.3
217
32.3
PSNMU-V1.4_AUG-EV-PASAV3_0096010
Pseudo-nitzschia multistriata
2.6e-22
107.8
221
31.2
Pp3c7_4200
Physcomitrella patens
7.7e-22
106.3
222
30.2
AA0003G02530
Aureococcus anophagefferens
1.3e-21
105.5
167
34.1
AA0230G00030
Aureococcus anophagefferens
1.3e-21
105.5
167
34.1
Pp3c11_22520
Physcomitrella patens
6.5e-21
103.2
222
30.2
Pp3c1_7500
Physcomitrella patens
8.5e-21
102.8
172
33.7
Pp3c4_16870
Physcomitrella patens
8.5e-21
102.8
216
29.2
Sro740_g195550
Seminavis robusta
3.2e-20
100.9
222
28.4
tho357060
Thalassiosira oceanica
7.2e-20
99.8
213
30.0
Sro68_g037840
Seminavis robusta
1.2e-19
99.0
222
27.9
fso167070
Fistulifera solaris
1.0e-18
95.9
212
29.7
sya00G83970
Synedra acus
6.7e-18
93.2
203
31.5
ptri147470
Phaeodactylum tricornutum
2.0e-17
91.7
216
28.2
Sro731_g194150
Seminavis robusta
3.3e-17
90.9
192
27.6
gsu30790
Galdieria sulphuraria
5.7e-17
90.1
237
24.9
Naga_100199g6
Nannochloropsis gaditana
7.4e-17
89.7
199
29.1
AT5G66510
Arabidopsis thaliana
1.7e-16
88.6
256
25.8
Cre06.g293850
Chlamydomonas reinhardtii
1.4e-15
85.5
215
32.1
ps00G81530
Pseudo-nitzschia multiseries
3.1e-15
84.3
202
30.7
ps00G40950
Pseudo-nitzschia multiseries
1.5e-14
82.0
185
29.2
gene4461
Fragilariopsis cylindrus
2.6e-14
81.3
201
26.9
CM13G00520
Cyanidioschyzon merolae
1.0e-13
79.3
248
24.6
gsu34770
Galdieria sulphuraria
2.2e-13
78.2
155
29.7
ps00G37150
Pseudo-nitzschia multiseries
3.8e-13
77.4
193
28.5
fso198020
Fistulifera solaris
5.0e-13
77.0
187
29.4
Sro796_g203670
Seminavis robusta
5.0e-13
77.0
188
31.4
tps147910
Thalassiosira pseudonana
5.0e-13
77.0
234
26.1
CC00G151430
Cyclotella cryptica
2.5e-12
74.7
152
29.6
fso121810
Fistulifera solaris
2.5e-12
74.7
212
26.9
ptri08410
Phaeodactylum tricornutum
2.5e-12
74.7
188
29.8
ptri08530
Phaeodactylum tricornutum
2.5e-12
74.7
188
29.8
fso23950
Fistulifera solaris
3.2e-12
74.3
187
28.3
sya00G77040
Synedra acus
4.2e-12
73.9
159
30.2
CC00G41180
Cyclotella cryptica
2.1e-11
71.6
217
24.9
PSNMU-V1.4_AUG-EV-PASAV3_0099860
Pseudo-nitzschia multistriata
2.1e-11
71.6
118
33.9
Cre09.g415850
Chlamydomonas reinhardtii
7.9e-11
69.7
172
29.7
tps56830
Thalassiosira pseudonana
1.8e-10
68.6
148
34.5
sya00G174380
Synedra acus
2.3e-10
68.2
148
28.4
tho589540
Thalassiosira oceanica
3.0e-10
67.8
103
35.0
gene2813
Fragilariopsis cylindrus
5.1e-10
67.0
163
26.4
gene14884
Fragilariopsis cylindrus
5.1e-10
67.0
123
33.3
Ec-10_002770
Ectocarpus siliculosus
2.6e-09
64.7
199
23.6
AA0002G00020
Aureococcus anophagefferens
1.3e-08
62.4
88
35.2
emh726740
Emiliania huxleyi
1.3e-08
62.4
207
23.7
Cre12.g516450
Chlamydomonas reinhardtii
2.2e-08
61.6
204
25.0
Naga_100187g5
Nannochloropsis gaditana
2.8e-08
61.2
99
29.3
tho558160
Thalassiosira oceanica
3.7e-08
60.8
179
30.2
CC00G42060
Cyclotella cryptica
4.8e-08
60.5
168
29.2
emh191260
Emiliania huxleyi
1.4e-07
58.9
155
27.1
ccr103560
Chondrus crispus
1.8e-07
58.5
204
21.6
Sro49_g028820
Seminavis robusta
1.8e-07
58.5
191
28.3
emh676960
Emiliania huxleyi
1.2e-06
55.8
67
38.8
fso79830
Fistulifera solaris
1.2e-06
55.8
196
25.5
fso122780
Fistulifera solaris
2.0e-06
55.1
199
25.1
Pp3c7_19540
Physcomitrella patens
2.0e-06
55.1
172
24.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing