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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte600420
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte600420
Paramecium tetraurelia
7.2e-270
930.6
452
100.0
pte666080
Paramecium tetraurelia
2.3e-260
899.0
452
95.6
AT5G27470
Arabidopsis thaliana
5.4e-132
472.6
448
53.3
gsu78080
Galdieria sulphuraria
7.0e-132
472.2
439
53.5
SPAC29A4.15
Schizosaccharomyces pombe
3.0e-130
466.8
446
53.8
Pp3c13_16820
Physcomitrella patens
3.9e-130
466.5
448
52.0
Ec-24_004300
Ectocarpus siliculosus
1.5e-129
464.5
451
54.5
WBGene00005663
Caenorhabditis elegans
8.0e-128
458.8
485
49.5
YDR023W
Saccharomyces cerevisiae strain S288C
8.0e-128
458.8
453
52.5
AA0005G00370
Aureococcus anophagefferens
1.0e-122
441.8
447
51.2
ccr102880
Chondrus crispus
4.3e-121
436.4
459
49.0
FBgn0031497
Drosophila melanogaster
3.6e-120
433.3
489
47.9
ENSG00000031698
Homo sapiens
3.6e-120
433.3
509
45.8
Cre03.g189400
Chlamydomonas reinhardtii
3.4e-118
426.8
455
50.3
ptri24290
Phaeodactylum tricornutum
3.4e-118
426.8
475
50.3
CM14G01780
Cyanidioschyzon merolae
3.7e-117
423.3
475
47.2
CC00G98430
Cyclotella cryptica
4.1e-116
419.9
474
48.9
gene16716
Fragilariopsis cylindrus
6.0e-115
416.0
458
49.6
gene4210
Fragilariopsis cylindrus
6.0e-115
416.0
458
49.6
PSNMU-V1.4_AUG-EV-PASAV3_0044860
Pseudo-nitzschia multistriata
6.0e-115
416.0
471
48.6
ps00G189790
Pseudo-nitzschia multiseries
1.3e-114
414.8
461
49.0
fso68300
Fistulifera solaris
1.7e-114
414.5
475
48.0
fso22240
Fistulifera solaris
3.9e-114
413.3
475
48.0
sya00G112740
Synedra acus
6.6e-114
412.5
464
48.5
emh621460
Emiliania huxleyi
3.3e-113
410.2
441
50.1
Naga_100067g2
Nannochloropsis gaditana
1.8e-111
404.4
377
53.8
tps202370
Thalassiosira pseudonana
4.4e-110
399.8
480
47.1
Sro251_g099270
Seminavis robusta
6.4e-109
396.0
471
46.3
Sro31_g020380
Seminavis robusta
1.4e-108
394.8
470
47.2
Pp3c4_17270
Physcomitrella patens
1.3e-106
388.3
330
57.3
tho477320
Thalassiosira oceanica
3.2e-76
287.3
343
46.1
Naga_100021g9
Nannochloropsis gaditana
3.9e-58
227.3
383
34.7
ccr109780
Chondrus crispus
1.7e-56
221.9
408
33.3
ptri51790
Phaeodactylum tricornutum
6.3e-56
219.9
354
35.0
gene11536
Fragilariopsis cylindrus
5.3e-55
216.9
361
34.3
AT1G11870
Arabidopsis thaliana
1.3e-53
212.2
348
36.2
fso113070
Fistulifera solaris
2.9e-53
211.1
340
35.6
gsu16210
Galdieria sulphuraria
6.5e-53
209.9
407
32.2
Pp3c5_28560
Physcomitrella patens
8.5e-53
209.5
425
33.4
tho11040
Thalassiosira oceanica
8.5e-53
209.5
417
31.7
fso43080
Fistulifera solaris
1.9e-52
208.4
405
33.1
Cre02.g082877
Chlamydomonas reinhardtii
7.2e-52
206.5
472
30.7
ps00G157630
Pseudo-nitzschia multiseries
9.4e-52
206.1
422
31.5
Sro530_g161270
Seminavis robusta
1.6e-51
205.3
400
33.5
CM11G00960
Cyanidioschyzon merolae
2.1e-51
204.9
379
35.1
tps99210
Thalassiosira pseudonana
2.1e-51
204.9
329
32.8
Ec-08_002360
Ectocarpus siliculosus
1.0e-50
202.6
429
29.8
sya00G98510
Synedra acus
1.8e-50
201.8
437
31.1
CC00G125230
Cyclotella cryptica
3.0e-50
201.1
358
31.6
ps00G17670
Pseudo-nitzschia multiseries
5.2e-50
200.3
367
32.4
PSNMU-V1.4_AUG-EV-PASAV3_0007150
Pseudo-nitzschia multistriata
5.7e-49
196.8
436
30.5
AA0009G01340
Aureococcus anophagefferens
3.1e-47
191.0
425
29.9
ENSG00000104835
Homo sapiens
1.9e-44
181.8
339
34.2
YHR011W
Saccharomyces cerevisiae strain S288C
2.7e-43
177.9
420
31.9
emh279960
Emiliania huxleyi
5.2e-42
173.7
424
30.2
SPAC25B8.06c
Schizosaccharomyces pombe
1.5e-41
172.2
417
28.8
FBgn0021750
Drosophila melanogaster
1.3e-40
169.1
277
32.9
WBGene00005662
Caenorhabditis elegans
2.3e-29
131.7
380
28.7
Cre02.g082825
Chlamydomonas reinhardtii
6.1e-27
123.6
193
37.3
sya00G214640
Synedra acus
2.1e-19
98.6
259
27.4
Pp3c3_17030
Physcomitrella patens
2.6e-17
91.7
70
55.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing