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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte589920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte589920
Paramecium tetraurelia
1.8e-238
826.2
424
100.0
pte45890
Paramecium tetraurelia
6.6e-132
472.2
446
60.1
ENSG00000043514
Homo sapiens
1.0e-20
102.8
443
27.8
WBGene00001740
Caenorhabditis elegans
1.3e-18
95.9
335
25.4
AT2G27760
Arabidopsis thaliana
6.4e-18
93.6
459
25.9
FBgn0043799
Drosophila melanogaster
6.4e-18
93.6
475
25.5
SPAC343.15
Schizosaccharomyces pombe
1.9e-17
92.0
459
24.0
YOR274W
Saccharomyces cerevisiae strain S288C
1.0e-15
86.3
447
24.4
AT3G23630
Arabidopsis thaliana
3.4e-11
71.2
106
31.1
Naga_100023g39
Nannochloropsis gaditana
3.4e-11
71.2
119
35.3
AT3G63110
Arabidopsis thaliana
1.3e-10
69.3
112
33.0
AT5G19040
Arabidopsis thaliana
3.7e-10
67.8
106
30.2
AT5G20040
Arabidopsis thaliana
3.7e-10
67.8
114
31.6
gsu06570
Galdieria sulphuraria
3.7e-10
67.8
151
30.5
gsu06590
Galdieria sulphuraria
3.7e-10
67.8
151
30.5
gsu117540
Galdieria sulphuraria
3.7e-10
67.8
151
30.5
gsu117560
Galdieria sulphuraria
3.7e-10
67.8
151
30.5
AT4G24650
Arabidopsis thaliana
6.4e-10
67.0
119
32.8
Ec-01_007830
Ectocarpus siliculosus
6.4e-10
67.0
110
34.5
CM19G04750
Cyanidioschyzon merolae
7.1e-09
63.5
103
33.0
AA0002G06740
Aureococcus anophagefferens
9.2e-09
63.2
101
34.7
AT1G68460
Arabidopsis thaliana
1.6e-08
62.4
111
28.8
Pp3c23_12150
Physcomitrella patens
2.7e-08
61.6
109
33.0
Pp3c23_12330
Physcomitrella patens
2.7e-08
61.6
109
33.0
Pp3c23_12370
Physcomitrella patens
2.7e-08
61.6
109
33.0
Pp3c27_70
Physcomitrella patens
7.8e-08
60.1
129
29.5
Pp3c3_37040
Physcomitrella patens
1.7e-07
58.9
104
34.6
AT1G25410
Arabidopsis thaliana
3.0e-07
58.2
107
32.7
Pp3c5_9400
Physcomitrella patens
3.9e-07
57.8
102
32.4
Pp3c16_6080
Physcomitrella patens
1.1e-06
56.2
104
32.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing