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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte473990
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte473990
Paramecium tetraurelia
0.0e+00
2232.6
1155
100.0
ENSG00000100150
Homo sapiens
2.3e-17
93.2
373
22.5
tps168090
Thalassiosira pseudonana
9.9e-13
77.8
374
22.7
PSNMU-V1.4_AUG-EV-PASAV3_0001730
Pseudo-nitzschia multistriata
4.9e-12
75.5
396
24.5
sya00G106840
Synedra acus
4.9e-12
75.5
477
21.6
gene14810
Fragilariopsis cylindrus
6.4e-12
75.1
373
23.6
SPBC26H8.04c
Schizosaccharomyces pombe
6.4e-12
75.1
367
21.5
ps00G171940
Pseudo-nitzschia multiseries
8.3e-12
74.7
408
22.8
FBgn0035227
Drosophila melanogaster
1.1e-11
74.3
394
22.3
ptri64220
Phaeodactylum tricornutum
1.4e-11
73.9
397
21.9
fso16160
Fistulifera solaris
1.9e-11
73.6
421
20.9
fso117840
Fistulifera solaris
5.4e-11
72.0
427
21.5
WBGene00011604
Caenorhabditis elegans
6.0e-10
68.6
332
21.4
CC00G148520
Cyclotella cryptica
1.7e-09
67.0
411
20.4
Sro635_g179140
Seminavis robusta
2.5e-08
63.2
407
21.6
YJR138W
Saccharomyces cerevisiae strain S288C
6.8e-06
55.1
330
19.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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