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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte398810
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte398810
Paramecium tetraurelia
6.3e-185
648.3
339
100.0
pte608260
Paramecium tetraurelia
6.1e-164
578.6
312
96.5
pte771510
Paramecium tetraurelia
2.3e-150
533.5
344
82.3
pte265440
Paramecium tetraurelia
1.4e-35
152.1
296
33.4
Cre06.g291700
Chlamydomonas reinhardtii
1.9e-35
151.8
301
36.5
pte07010
Paramecium tetraurelia
2.7e-34
147.9
292
32.9
Ec-15_001990
Ectocarpus siliculosus
4.3e-32
140.6
339
29.2
ENSG00000130363
Homo sapiens
9.5e-32
139.4
294
32.0
pte314790
Paramecium tetraurelia
8.1e-31
136.3
334
29.6
AA0045G00100
Aureococcus anophagefferens
6.8e-30
133.3
296
30.4
pte332770
Paramecium tetraurelia
1.3e-28
129.0
223
38.6
pte279880
Paramecium tetraurelia
4.9e-28
127.1
223
35.9
pte264470
Paramecium tetraurelia
6.0e-26
120.2
222
36.0
emh54760
Emiliania huxleyi
1.1e-22
109.4
135
43.7
Pp3c7_6220
Physcomitrella patens
1.3e-20
102.4
256
29.7
FBgn0052392
Drosophila melanogaster
4.9e-20
100.5
160
38.1
Ec-08_000250
Ectocarpus siliculosus
2.0e-13
78.6
235
31.5
pte441640
Paramecium tetraurelia
7.1e-11
70.1
322
25.5
pte31990
Paramecium tetraurelia
1.6e-10
68.9
318
25.2
Pp3c13_8010
Physcomitrella patens
1.5e-08
62.4
195
29.2
AA0006G04130
Aureococcus anophagefferens
3.6e-07
57.8
265
26.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing