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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte395240
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte395240
Paramecium tetraurelia
7.3e-96
351.7
237
100.0
pte350990
Paramecium tetraurelia
1.1e-67
258.1
237
82.3
pte736080
Paramecium tetraurelia
7.9e-42
172.2
156
59.0
pte702200
Paramecium tetraurelia
2.6e-21
104.0
159
50.9
Pp3c7_20570
Physcomitrella patens
2.9e-12
73.9
78
44.9
Pp3c11_8530
Physcomitrella patens
6.5e-12
72.8
78
44.9
ENSG00000029993
Homo sapiens
8.5e-12
72.4
79
39.2
Pp3c16_10290
Physcomitrella patens
1.4e-11
71.6
80
43.8
Pp3c16_10320
Physcomitrella patens
1.4e-11
71.6
80
43.8
Sro397_g134480
Seminavis robusta
7.2e-11
69.3
81
37.0
ptri230810
Phaeodactylum tricornutum
9.4e-11
68.9
90
37.8
ENSG00000140382
Homo sapiens
1.0e-09
65.5
79
39.2
AT1G20693
Arabidopsis thaliana
1.8e-09
64.7
81
38.3
fso140090
Fistulifera solaris
3.0e-09
63.9
80
32.5
YBR089C-A
Saccharomyces cerevisiae strain S288C
5.2e-09
63.2
91
31.9
YPR052C
Saccharomyces cerevisiae strain S288C
5.2e-09
63.2
86
36.0
gene17050
Fragilariopsis cylindrus
6.7e-09
62.8
70
35.7
fso129880
Fistulifera solaris
6.7e-09
62.8
98
30.6
Naga_100043g46
Nannochloropsis gaditana
6.7e-09
62.8
73
42.5
sya00G230070
Synedra acus
8.8e-09
62.4
84
35.7
tho457600
Thalassiosira oceanica
8.8e-09
62.4
81
37.0
Ec-12_008000
Ectocarpus siliculosus
1.1e-08
62.0
75
41.3
ptri169820
Phaeodactylum tricornutum
2.0e-08
61.2
84
34.5
fso26710
Fistulifera solaris
2.6e-08
60.8
92
35.9
Pp3c17_7580
Physcomitrella patens
3.3e-08
60.5
87
35.6
Pp3c13_20600
Physcomitrella patens
5.7e-08
59.7
83
33.7
AT2G17560
Arabidopsis thaliana
7.4e-08
59.3
128
30.5
PSNMU-V1.4_AUG-EV-PASAV3_0047540
Pseudo-nitzschia multistriata
7.4e-08
59.3
69
39.1
ps00G28660
Pseudo-nitzschia multiseries
9.7e-08
58.9
81
32.1
Sro610_g175190
Seminavis robusta
9.7e-08
58.9
96
29.2
gene20036
Fragilariopsis cylindrus
1.3e-07
58.5
97
30.9
gene6233
Fragilariopsis cylindrus
1.3e-07
58.5
83
34.9
sya00G250520
Synedra acus
1.7e-07
58.2
84
32.1
sya00G48650
Synedra acus
2.2e-07
57.8
82
32.9
AA0004G03570
Aureococcus anophagefferens
3.7e-07
57.0
82
36.6
Cre11.g481050
Chlamydomonas reinhardtii
3.7e-07
57.0
96
31.2
PSNMU-V1.4_AUG-EV-PASAV3_0027480
Pseudo-nitzschia multistriata
3.7e-07
57.0
88
30.7
WBGene00004949
Caenorhabditis elegans
4.8e-07
56.6
103
30.1
ENSG00000189403
Homo sapiens
4.8e-07
56.6
64
39.1
sya00G00850
Synedra acus
4.8e-07
56.6
71
35.2
AT4G35570
Arabidopsis thaliana
6.3e-07
56.2
87
35.6
emh763970
Emiliania huxleyi
6.3e-07
56.2
80
33.8
gene19259
Fragilariopsis cylindrus
6.3e-07
56.2
94
31.9
fso146930
Fistulifera solaris
6.3e-07
56.2
84
34.5
ENSG00000064961
Homo sapiens
6.3e-07
56.2
80
32.5
YKL032C
Saccharomyces cerevisiae strain S288C
6.3e-07
56.2
81
30.9
sya00G00830
Synedra acus
6.3e-07
56.2
82
31.7
AT3G28730
Arabidopsis thaliana
8.2e-07
55.8
71
33.8
sya00G234790
Synedra acus
8.2e-07
55.8
81
32.1
tps48590
Thalassiosira pseudonana
8.2e-07
55.8
66
39.4
Pp3c25_7410
Physcomitrella patens
1.1e-06
55.5
67
40.3
sya00G270400
Synedra acus
1.1e-06
55.5
84
28.6
FBgn0011764
Drosophila melanogaster
1.4e-06
55.1
84
34.5
sya00G00890
Synedra acus
1.4e-06
55.1
82
31.7
sya00G48640
Synedra acus
1.4e-06
55.1
82
30.5
sya00G90600
Synedra acus
1.4e-06
55.1
82
30.5
sya00G234810
Synedra acus
1.4e-06
55.1
81
32.1
WBGene00001972
Caenorhabditis elegans
1.8e-06
54.7
77
32.5
fso163030
Fistulifera solaris
1.8e-06
54.7
127
22.0
tps08700
Thalassiosira pseudonana
1.8e-06
54.7
77
33.8
AA0001G02840
Aureococcus anophagefferens
2.4e-06
54.3
77
33.8
ptri228630
Phaeodactylum tricornutum
2.4e-06
54.3
98
34.7
YDL002C
Saccharomyces cerevisiae strain S288C
2.4e-06
54.3
84
31.0
sya00G197170
Synedra acus
2.4e-06
54.3
74
32.4
ps00G135190
Pseudo-nitzschia multiseries
3.1e-06
53.9
80
28.8
YMR072W
Saccharomyces cerevisiae strain S288C
3.1e-06
53.9
82
30.5
sya00G02400
Synedra acus
3.1e-06
53.9
82
30.5
Ec-11_005660
Ectocarpus siliculosus
4.1e-06
53.5
59
42.4
fso192860
Fistulifera solaris
4.1e-06
53.5
73
31.5
sya00G48750
Synedra acus
4.1e-06
53.5
82
29.3
sya00G270430
Synedra acus
4.1e-06
53.5
84
27.4
fso101860
Fistulifera solaris
5.3e-06
53.1
73
31.5
sya00G172830
Synedra acus
5.3e-06
53.1
81
30.9
sya00G250510
Synedra acus
5.3e-06
53.1
84
27.4
ps00G55810
Pseudo-nitzschia multiseries
7.0e-06
52.8
112
28.6
sya00G91260
Synedra acus
7.0e-06
52.8
82
30.5
sya00G125000
Synedra acus
7.0e-06
52.8
82
29.3
Sro2907_g340020
Seminavis robusta
9.1e-06
52.4
93
32.3
sya00G48710
Synedra acus
9.1e-06
52.4
82
29.3
sya00G48910
Synedra acus
9.1e-06
52.4
82
29.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (5 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (21 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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