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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte150650
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte150650
Paramecium tetraurelia
9.8e-116
417.5
215
100.0
pte120150
Paramecium tetraurelia
1.8e-106
386.7
215
93.0
pte347800
Paramecium tetraurelia
3.8e-104
379.0
215
89.8
pte391730
Paramecium tetraurelia
3.8e-104
379.0
215
89.8
ps00G01800
Pseudo-nitzschia multiseries
1.1e-18
95.1
179
33.5
Sro1247_g255840
Seminavis robusta
1.4e-18
94.7
203
33.5
tps208450
Thalassiosira pseudonana
1.4e-18
94.7
178
32.6
CC00G159510
Cyclotella cryptica
1.9e-18
94.4
184
31.0
tho290880
Thalassiosira oceanica
3.2e-18
93.6
178
33.1
gene14016
Fragilariopsis cylindrus
9.4e-18
92.0
207
30.0
ptri180750
Phaeodactylum tricornutum
5.2e-16
86.3
189
30.7
sya00G66650
Synedra acus
8.8e-16
85.5
178
32.6
sya00G66660
Synedra acus
8.8e-16
85.5
178
32.6
WBGene00000230
Caenorhabditis elegans
2.6e-15
84.0
195
28.7
gsu_chlor00G01060
Galdieria sulphuraria
9.7e-15
82.0
163
29.4
fso25330
Fistulifera solaris
4.1e-13
76.6
202
30.2
fso116180
Fistulifera solaris
5.3e-13
76.3
202
30.2
ENSG00000241837
Homo sapiens
9.1e-13
75.5
185
28.1
Pp3c21_15430
Physcomitrella patens
3.8e-11
70.1
174
26.4
Pp3c21_13430
Physcomitrella patens
6.5e-11
69.3
174
26.4
Pp3c11_16260
Physcomitrella patens
5.5e-10
66.2
177
25.4
ccr147380
Chondrus crispus
9.4e-10
65.5
185
24.3
YDR298C
Saccharomyces cerevisiae strain S288C
1.2e-09
65.1
212
25.5
CM05G01980
Cyanidioschyzon merolae
2.7e-09
63.9
178
27.5
CM07G00040
Cyanidioschyzon merolae
2.7e-09
63.9
178
27.5
SPCC1840.06
Schizosaccharomyces pombe
3.6e-09
63.5
183
26.8
syaC00790
Synedra acus
8.0e-09
62.4
172
24.4
AT5G13450
Arabidopsis thaliana
3.0e-08
60.5
202
22.8
sya00G268780
Synedra acus
5.2e-08
59.7
175
24.6
FBgn0016691
Drosophila melanogaster
8.8e-08
58.9
183
25.1
sya00G10830
Synedra acus
2.0e-07
57.8
167
26.3
gsu28270
Galdieria sulphuraria
1.3e-06
55.1
167
22.8
emh315740
Emiliania huxleyi
1.7e-06
54.7
188
24.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (5 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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