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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G90130
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G90130
Pseudo-nitzschia multiseries
1.0e-64
247.3
124
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0016650
Pseudo-nitzschia multistriata
9.5e-55
214.2
124
86.3
gene9950
Fragilariopsis cylindrus
6.0e-33
141.7
104
68.3
Sro174_g076640
Seminavis robusta
1.2e-30
134.0
122
62.3
fso53830
Fistulifera solaris
1.2e-28
127.5
124
55.6
tho38320
Thalassiosira oceanica
2.0e-28
126.7
124
55.6
fso129470
Fistulifera solaris
2.6e-28
126.3
106
59.4
ptri229970
Phaeodactylum tricornutum
1.4e-26
120.6
104
58.7
ps00G12920
Pseudo-nitzschia multiseries
5.2e-21
102.1
95
53.7
PSNMU-V1.4_AUG-EV-PASAV3_0050130
Pseudo-nitzschia multistriata
6.8e-21
101.7
100
51.0
CC00G146110
Cyclotella cryptica
2.0e-20
100.1
97
53.6
sya00G258880
Synedra acus
1.7e-19
97.1
109
51.4
fso64260
Fistulifera solaris
2.9e-19
96.3
117
46.2
fso99600
Fistulifera solaris
4.9e-19
95.5
107
48.6
ptri176990
Phaeodactylum tricornutum
2.4e-18
93.2
119
42.9
tps01320
Thalassiosira pseudonana
3.2e-18
92.8
97
51.5
Sro126_g060630
Seminavis robusta
7.8e-17
88.2
107
43.9
sya00G124130
Synedra acus
1.7e-16
87.0
126
44.4
gene13698
Fragilariopsis cylindrus
3.0e-16
86.3
92
50.0
Ec-03_001810
Ectocarpus siliculosus
8.7e-16
84.7
99
50.5
Pp3c25_15060
Physcomitrella patens
8.7e-16
84.7
127
40.9
fso39700
Fistulifera solaris
2.5e-15
83.2
119
43.7
tps84810
Thalassiosira pseudonana
2.5e-15
83.2
119
46.2
gene1306
Fragilariopsis cylindrus
3.3e-15
82.8
124
43.5
Sro20_g014070
Seminavis robusta
3.3e-15
82.8
117
45.3
fso169970
Fistulifera solaris
4.3e-15
82.4
124
42.7
ps00G08000
Pseudo-nitzschia multiseries
5.6e-15
82.0
123
41.5
Sro555_g165630
Seminavis robusta
5.6e-15
82.0
126
42.9
AT3G59980
Arabidopsis thaliana
9.6e-15
81.3
127
44.1
fso109630
Fistulifera solaris
9.6e-15
81.3
119
43.7
Naga_100017g70
Nannochloropsis gaditana
9.6e-15
81.3
98
50.0
Ec-18_004570
Ectocarpus siliculosus
2.1e-14
80.1
124
39.5
CC00G119710
Cyclotella cryptica
2.8e-14
79.7
124
41.9
sya00G221550
Synedra acus
2.8e-14
79.7
103
43.7
CC00G49800
Cyclotella cryptica
3.6e-14
79.3
119
42.9
fso84340
Fistulifera solaris
6.2e-14
78.6
124
41.1
tho161400
Thalassiosira oceanica
6.2e-14
78.6
127
41.7
emh613500
Emiliania huxleyi
8.1e-14
78.2
105
46.7
gene18232
Fragilariopsis cylindrus
8.1e-14
78.2
130
40.8
gene678
Fragilariopsis cylindrus
1.8e-13
77.0
123
39.8
tho368780
Thalassiosira oceanica
1.8e-13
77.0
114
45.6
PSNMU-V1.4_AUG-EV-PASAV3_0082870
Pseudo-nitzschia multistriata
2.4e-13
76.6
124
41.9
ps00G106110
Pseudo-nitzschia multiseries
2.4e-13
76.6
124
40.3
ps00G84740
Pseudo-nitzschia multiseries
3.1e-13
76.3
126
39.7
emh675260
Emiliania huxleyi
4.0e-13
75.9
123
40.7
emh202630
Emiliania huxleyi
4.0e-13
75.9
123
40.7
ptri18330
Phaeodactylum tricornutum
4.0e-13
75.9
127
40.9
sya00G56360
Synedra acus
4.0e-13
75.9
117
40.2
PSNMU-V1.4_AUG-EV-PASAV3_0099320
Pseudo-nitzschia multistriata
5.2e-13
75.5
129
40.3
tho59920
Thalassiosira oceanica
5.2e-13
75.5
124
39.5
AA0012G00350
Aureococcus anophagefferens
6.9e-13
75.1
117
40.2
ENSG00000164022
Homo sapiens
6.9e-13
75.1
124
37.1
Sro625_g177520
Seminavis robusta
9.0e-13
74.7
120
39.2
tps09680
Thalassiosira pseudonana
9.0e-13
74.7
106
43.4
sya00G80910
Synedra acus
1.2e-12
74.3
102
37.3
Pp3c13_2300
Physcomitrella patens
1.5e-12
73.9
108
43.5
Cre01.g046652
Chlamydomonas reinhardtii
3.4e-12
72.8
128
42.2
Pp3c3_5590
Physcomitrella patens
5.8e-12
72.0
102
43.1
CC00G11570
Cyclotella cryptica
7.6e-12
71.6
97
45.4
PSNMU-V1.4_AUG-EV-PASAV3_0031310
Pseudo-nitzschia multistriata
7.6e-12
71.6
97
44.3
tps33260
Thalassiosira pseudonana
9.9e-12
71.2
120
40.8
ptri157070
Phaeodactylum tricornutum
1.1e-10
67.8
124
36.3
fso71400
Fistulifera solaris
1.4e-10
67.4
120
37.5
Pp3c15_24000
Physcomitrella patens
1.4e-10
67.4
105
39.0
AA0016G00770
Aureococcus anophagefferens
1.9e-10
67.0
73
49.3
AT4G13780
Arabidopsis thaliana
4.2e-10
65.9
124
38.7
fso190180
Fistulifera solaris
5.4e-10
65.5
120
37.5
AA0014G01570
Aureococcus anophagefferens
7.1e-10
65.1
124
37.1
WBGene00003415
Caenorhabditis elegans
9.3e-10
64.7
104
40.4
Cre03.g145967
Chlamydomonas reinhardtii
9.3e-10
64.7
118
33.9
Cre02.g087950
Chlamydomonas reinhardtii
1.6e-09
63.9
119
37.0
AA0005G01990
Aureococcus anophagefferens
4.6e-09
62.4
122
36.9
gsu103970
Galdieria sulphuraria
6.0e-09
62.0
102
38.2
AT2G40660
Arabidopsis thaliana
7.8e-09
61.6
114
38.6
emh427310
Emiliania huxleyi
1.0e-08
61.2
120
35.8
ptri109240
Phaeodactylum tricornutum
1.7e-08
60.5
97
39.2
ENSG00000134684
Homo sapiens
2.3e-08
60.1
92
39.1
gsu100370
Galdieria sulphuraria
8.7e-08
58.2
117
36.8
FBgn0027080
Drosophila melanogaster
2.5e-07
56.6
93
38.7
emh57480
Emiliania huxleyi
3.3e-07
56.2
122
35.2
pte272170
Paramecium tetraurelia
3.3e-07
56.2
105
39.0
gsu100390
Galdieria sulphuraria
5.6e-07
55.5
95
41.1
Naga_100028g2
Nannochloropsis gaditana
5.6e-07
55.5
111
38.7
Naga_100004g19
Nannochloropsis gaditana
7.3e-07
55.1
106
31.1
tho156480
Thalassiosira oceanica
9.6e-07
54.7
127
35.4
Pp3c1_5820
Physcomitrella patens
1.3e-06
54.3
105
39.0
emh490140
Emiliania huxleyi
3.6e-06
52.8
56
53.6
Cre08.g364650
Chlamydomonas reinhardtii
8.1e-06
51.6
107
36.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (5 genes)
Synedra acus (5 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing