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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G76190
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G76190
Pseudo-nitzschia multiseries
1.8e-172
606.7
309
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0104020
Pseudo-nitzschia multistriata
1.4e-161
570.5
309
92.9
gene7892
Fragilariopsis cylindrus
1.7e-146
520.4
286
91.6
Sro1985_g309420
Seminavis robusta
3.1e-140
499.6
299
83.6
fso58710
Fistulifera solaris
1.4e-124
447.6
308
72.4
fso144880
Fistulifera solaris
4.1e-124
446.0
306
73.2
tho368340
Thalassiosira oceanica
2.0e-115
417.2
311
68.2
CC00G185670
Cyclotella cryptica
7.7e-115
415.2
294
72.1
tps166260
Thalassiosira pseudonana
1.7e-114
414.1
307
70.4
ptri215090
Phaeodactylum tricornutum
6.1e-104
379.0
288
65.6
Ec-02_003040
Ectocarpus siliculosus
4.4e-94
346.3
295
60.3
AA0029G00180
Aureococcus anophagefferens
3.1e-87
323.6
280
58.9
AT3G11270
Arabidopsis thaliana
1.1e-79
298.5
281
52.3
Pp3c16_16110
Physcomitrella patens
1.4e-79
298.1
281
54.1
AT5G05780
Arabidopsis thaliana
2.3e-79
297.4
281
52.7
ccr70800
Chondrus crispus
9.9e-78
292.0
282
52.5
emh684370
Emiliania huxleyi
6.0e-75
282.7
278
51.1
emh124350
Emiliania huxleyi
6.0e-75
282.7
278
51.1
Cre06.g278256
Chlamydomonas reinhardtii
2.5e-73
277.3
279
48.4
gsu133340
Galdieria sulphuraria
3.6e-72
273.5
287
48.1
ENSG00000103035
Homo sapiens
8.1e-72
272.3
276
50.4
SPCC1682.10
Schizosaccharomyces pombe
2.3e-66
254.2
287
44.9
WBGene00004464
Caenorhabditis elegans
3.3e-65
250.4
283
48.4
CM20G04310
Cyanidioschyzon merolae
2.2e-61
237.7
296
42.6
YOR261C
Saccharomyces cerevisiae strain S288C
1.2e-59
231.9
298
39.9
pte261780
Paramecium tetraurelia
1.6e-59
231.5
280
44.6
pte557650
Paramecium tetraurelia
2.1e-59
231.1
280
44.6
sya00G04700
Synedra acus
1.5e-46
188.3
110
81.8
Naga_100998g2
Nannochloropsis gaditana
3.7e-40
167.2
124
64.5
ENSG00000175390
Homo sapiens
9.4e-20
99.4
279
27.2
Pp3c11_20930
Physcomitrella patens
8.0e-19
96.3
278
27.3
AT2G39990
Arabidopsis thaliana
1.5e-17
92.0
274
27.7
Ec-15_000300
Ectocarpus siliculosus
3.3e-17
90.9
278
28.4
AT5G56280
Arabidopsis thaliana
8.2e-16
86.3
300
24.0
ENSG00000279081
Homo sapiens
2.4e-15
84.7
279
27.2
ENSG00000281175
Homo sapiens
2.4e-15
84.7
279
27.2
Pp3c7_5560
Physcomitrella patens
2.4e-15
84.7
244
27.0
Pp3c14_22830
Physcomitrella patens
7.0e-15
83.2
287
22.6
ENSG00000168090
Homo sapiens
1.2e-14
82.4
310
21.9
tho387260
Thalassiosira oceanica
4.5e-14
80.5
289
23.2
FBgn0037270
Drosophila melanogaster
5.9e-14
80.1
279
26.9
AT4G26430
Arabidopsis thaliana
7.7e-14
79.7
300
23.7
tps215930
Thalassiosira pseudonana
1.3e-13
79.0
287
23.0
ps00G134580
Pseudo-nitzschia multiseries
2.7e-11
71.2
287
22.3
sya00G216510
Synedra acus
1.2e-09
65.9
198
27.8
WBGene00001229
Caenorhabditis elegans
2.6e-09
64.7
297
23.2
emh444620
Emiliania huxleyi
1.8e-07
58.5
135
30.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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