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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G39060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G39060
Pseudo-nitzschia multiseries
0.0e+00
5495.2
2918
100.0
ptri97370
Phaeodactylum tricornutum
0.0e+00
2611.3
3098
48.4
Sro397_g134430
Seminavis robusta
0.0e+00
2575.0
3201
47.9
fso117180
Fistulifera solaris
0.0e+00
2403.2
3201
46.1
fso50450
Fistulifera solaris
0.0e+00
2390.5
3199
46.1
PSNMU-V1.4_AUG-EV-PASAV3_0065810
Pseudo-nitzschia multistriata
0.0e+00
2159.4
2054
62.2
CC00G17000
Cyclotella cryptica
0.0e+00
1878.2
3235
39.4
tps205130
Thalassiosira pseudonana
0.0e+00
1872.4
3553
38.0
sya00G187300
Synedra acus
0.0e+00
1595.5
2106
45.6
Sro397_g134410
Seminavis robusta
0.0e+00
1506.1
1813
49.0
tho145400
Thalassiosira oceanica
0.0e+00
1405.2
2056
42.9
sya00G61890
Synedra acus
8.4e-178
627.5
869
45.2
sya00G144450
Synedra acus
5.7e-166
588.2
854
43.2
gene6541
Fragilariopsis cylindrus
5.4e-108
395.6
298
70.5
Naga_100023g38
Nannochloropsis gaditana
3.5e-99
366.3
2840
22.8
fso22080
Fistulifera solaris
2.3e-34
151.0
1155
21.1
fso131290
Fistulifera solaris
4.4e-33
146.7
1193
21.7
Sro1087_g239810
Seminavis robusta
1.8e-31
141.4
1243
21.7
ptri25880
Phaeodactylum tricornutum
3.1e-31
140.6
1230
21.1
Sro430_g141370
Seminavis robusta
4.1e-31
140.2
1195
21.5
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
1.6e-30
138.3
1214
20.7
Ec-21_002440
Ectocarpus siliculosus
3.7e-24
117.1
218
34.4
gene16175
Fragilariopsis cylindrus
3.1e-23
114.0
87
54.0
gene4450
Fragilariopsis cylindrus
3.1e-23
114.0
87
54.0
Ec-11_002810
Ectocarpus siliculosus
2.7e-22
110.9
72
59.7
ps00G146680
Pseudo-nitzschia multiseries
3.5e-22
110.5
79
54.4
Naga_100073g7
Nannochloropsis gaditana
5.9e-22
109.8
72
58.3
tps162180
Thalassiosira pseudonana
5.0e-21
106.7
72
58.3
sya00G39620
Synedra acus
6.1e-19
99.8
326
28.5
CC00G109250
Cyclotella cryptica
1.4e-18
98.6
1362
21.4
emh202550
Emiliania huxleyi
2.0e-17
94.7
72
54.2
emh05340
Emiliania huxleyi
2.0e-17
94.7
72
54.2
Cre02.g089237
Chlamydomonas reinhardtii
9.8e-17
92.4
70
50.0
ccr96920
Chondrus crispus
3.7e-16
90.5
84
45.2
WBGene00016326
Caenorhabditis elegans
6.3e-16
89.7
163
30.7
tho249240
Thalassiosira oceanica
1.1e-15
89.0
159
35.2
ENSG00000159459
Homo sapiens
1.4e-15
88.6
70
50.0
ENSG00000024048
Homo sapiens
1.4e-15
88.6
163
30.1
AT5G02310
Arabidopsis thaliana
3.1e-15
87.4
89
46.1
Pp3c3_24510
Physcomitrella patens
3.1e-15
87.4
136
38.2
ps00G146700
Pseudo-nitzschia multiseries
3.1e-15
87.4
97
44.3
Pp3c17_2850
Physcomitrella patens
5.4e-15
86.7
122
36.1
Pp3c8_2940
Physcomitrella patens
7.0e-15
86.3
71
52.1
Pp3c8_2930
Physcomitrella patens
7.0e-15
86.3
71
52.1
gsu119960
Galdieria sulphuraria
1.2e-14
85.5
68
52.9
Pp3c10_20380
Physcomitrella patens
1.2e-14
85.5
71
50.7
Pp3c7_22570
Physcomitrella patens
1.6e-14
85.1
74
44.6
Pp3c9_4700
Physcomitrella patens
3.5e-14
84.0
157
30.6
SPAC15A10.11
Schizosaccharomyces pombe
5.9e-14
83.2
75
44.0
Pp3c15_3560
Physcomitrella patens
7.7e-14
82.8
71
43.7
FBgn0030809
Drosophila melanogaster
1.0e-13
82.4
68
48.5
Pp3c3_37220
Physcomitrella patens
1.3e-13
82.0
71
50.7
Pp3c2_29090
Physcomitrella patens
5.5e-12
76.6
69
43.5
SPBC19C7.02
Schizosaccharomyces pombe
7.2e-12
76.3
80
38.8
ENSG00000144357
Homo sapiens
1.6e-11
75.1
103
35.9
emh641100
Emiliania huxleyi
4.7e-11
73.6
120
35.8
emh55720
Emiliania huxleyi
7.5e-09
66.2
85
37.6
WBGene00017373
Caenorhabditis elegans
1.2e-06
58.9
89
31.5
tho406880
Thalassiosira oceanica
1.2e-06
58.9
287
24.7
emh485450
Emiliania huxleyi
4.5e-06
57.0
142
29.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing