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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G17560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G17560
Pseudo-nitzschia multiseries
1.0e-84
314.3
185
100.0
gene8333
Fragilariopsis cylindrus
1.0e-73
277.7
194
86.1
PSNMU-V1.4_AUG-EV-PASAV3_0070030
Pseudo-nitzschia multistriata
4.5e-69
262.3
185
87.6
fso45850
Fistulifera solaris
2.3e-65
250.0
185
72.4
fso127120
Fistulifera solaris
2.3e-65
250.0
185
72.4
Sro661_g183260
Seminavis robusta
3.7e-63
242.7
185
71.4
Sro1056_g236200
Seminavis robusta
3.7e-63
242.7
185
70.8
CC00G196720
Cyclotella cryptica
3.1e-62
239.6
168
74.4
ptri215410
Phaeodactylum tricornutum
4.1e-62
239.2
185
70.3
tps71120
Thalassiosira pseudonana
2.7e-61
236.5
164
75.6
sya00G43790
Synedra acus
1.5e-59
230.7
185
68.1
AA0002G06360
Aureococcus anophagefferens
2.3e-57
223.4
167
70.1
Naga_100005g56
Nannochloropsis gaditana
6.8e-57
221.9
171
66.7
Ec-07_004070
Ectocarpus siliculosus
6.3e-55
215.3
171
65.5
sya00G13530
Synedra acus
3.6e-50
199.5
168
65.5
sya00G163700
Synedra acus
1.3e-47
191.0
167
59.9
tho573320
Thalassiosira oceanica
1.6e-45
184.1
139
74.1
tps30630
Thalassiosira pseudonana
1.6e-42
174.1
167
62.9
gene16519
Fragilariopsis cylindrus
7.5e-40
165.2
166
66.9
tho234600
Thalassiosira oceanica
7.5e-40
165.2
115
71.3
PSNMU-V1.4_AUG-EV-PASAV3_0044610
Pseudo-nitzschia multistriata
2.4e-38
160.2
166
65.1
sya00G84160
Synedra acus
2.4e-38
160.2
155
54.2
ps00G86310
Pseudo-nitzschia multiseries
7.0e-38
158.7
171
61.4
pte442100
Paramecium tetraurelia
6.6e-36
152.1
121
62.8
ptri227610
Phaeodactylum tricornutum
8.6e-36
151.8
164
48.8
sya00G84090
Synedra acus
1.6e-34
147.5
105
66.7
fso129490
Fistulifera solaris
3.6e-34
146.4
170
55.3
fso53850
Fistulifera solaris
6.2e-34
145.6
167
55.7
sya00G259410
Synedra acus
6.2e-34
145.6
170
45.9
sya00G84150
Synedra acus
1.5e-32
141.0
161
50.3
FBgn0025637
Drosophila melanogaster
4.4e-32
139.4
169
44.4
SPBC409.05
Schizosaccharomyces pombe
4.4e-32
139.4
170
42.9
WBGene00004807
Caenorhabditis elegans
7.5e-32
138.7
119
55.5
Pp3c20_7590
Physcomitrella patens
7.5e-32
138.7
169
47.9
Pp3c20_7680
Physcomitrella patens
7.5e-32
138.7
169
47.9
AT1G75950
Arabidopsis thaliana
9.8e-32
138.3
119
57.1
Pp3c2_5520
Physcomitrella patens
9.8e-32
138.3
170
47.6
Sro696_g188910
Seminavis robusta
1.7e-31
137.5
179
48.0
Cre12.g501200
Chlamydomonas reinhardtii
2.9e-31
136.7
166
47.6
ENSG00000113558
Homo sapiens
1.4e-30
134.4
169
43.8
Sro696_g188900
Seminavis robusta
1.9e-30
134.0
150
48.0
Ec-09_004320
Ectocarpus siliculosus
2.4e-30
133.7
170
42.9
Sro1805_g298840
Seminavis robusta
2.4e-30
133.7
155
46.5
gsu79490
Galdieria sulphuraria
3.2e-30
133.3
174
41.4
AT4G34210
Arabidopsis thaliana
3.5e-29
129.8
120
57.5
FBgn0026176
Drosophila melanogaster
7.8e-29
128.6
119
52.9
AT4G34470
Arabidopsis thaliana
1.3e-28
127.9
120
56.7
tho285880
Thalassiosira oceanica
2.3e-28
127.1
66
95.5
WBGene00004808
Caenorhabditis elegans
1.5e-27
124.4
119
50.4
emh635360
Emiliania huxleyi
3.3e-27
123.2
120
56.7
AT5G42190
Arabidopsis thaliana
4.3e-27
122.9
178
41.6
YDR328C
Saccharomyces cerevisiae strain S288C
5.6e-27
122.5
191
50.3
ccr168540
Chondrus crispus
2.8e-26
120.2
172
38.4
AT1G20140
Arabidopsis thaliana
1.4e-25
117.9
120
50.0
tho179600
Thalassiosira oceanica
3.1e-25
116.7
141
53.9
WBGene00004809
Caenorhabditis elegans
8.9e-25
115.2
119
46.2
tho121280
Thalassiosira oceanica
2.0e-24
114.0
182
36.8
FBgn0034863
Drosophila melanogaster
4.4e-24
112.8
168
39.9
sya00G163740
Synedra acus
4.4e-24
112.8
75
72.0
tps109320
Thalassiosira pseudonana
7.6e-24
112.1
167
39.5
CM16G01190
Cyanidioschyzon merolae
1.3e-23
111.3
167
38.3
WBGene00004810
Caenorhabditis elegans
1.7e-23
110.9
168
36.3
Pp3c1_36090
Physcomitrella patens
1.7e-23
110.9
165
39.4
CC00G117540
Cyclotella cryptica
4.9e-23
109.4
167
35.9
AT3G21850
Arabidopsis thaliana
6.4e-23
109.0
122
46.7
AT2G25700
Arabidopsis thaliana
1.1e-22
108.2
120
46.7
AT3G60010
Arabidopsis thaliana
1.1e-22
108.2
170
39.4
Sro119_g058220
Seminavis robusta
1.2e-21
104.8
172
47.7
AT3G60020
Arabidopsis thaliana
2.1e-21
104.0
122
46.7
AT2G03170
Arabidopsis thaliana
7.8e-21
102.1
121
45.5
tps47390
Thalassiosira pseudonana
1.7e-20
100.9
117
41.0
AT1G10230
Arabidopsis thaliana
3.9e-20
99.8
117
44.4
fso53420
Fistulifera solaris
5.1e-20
99.4
121
43.0
AT3G21860
Arabidopsis thaliana
8.6e-20
98.6
116
44.0
FBgn0026175
Drosophila melanogaster
8.6e-20
98.6
162
35.2
sya00G163780
Synedra acus
8.6e-20
98.6
102
50.0
WBGene00004811
Caenorhabditis elegans
2.5e-19
97.1
157
35.0
ps00G40280
Pseudo-nitzschia multiseries
3.3e-19
96.7
166
37.3
gene6053
Fragilariopsis cylindrus
5.6e-19
95.9
202
42.6
CC00G46080
Cyclotella cryptica
9.6e-19
95.1
76
60.5
FBgn0026174
Drosophila melanogaster
1.2e-18
94.7
162
33.3
AT3G25650
Arabidopsis thaliana
2.8e-18
93.6
176
35.2
CC00G186010
Cyclotella cryptica
8.1e-18
92.0
120
43.3
AT2G03160
Arabidopsis thaliana
1.1e-17
91.7
150
35.3
fso53410
Fistulifera solaris
1.1e-17
91.7
122
36.1
sya00G218460
Synedra acus
5.2e-17
89.4
182
38.5
AT2G03190
Arabidopsis thaliana
1.2e-16
88.2
128
38.3
AT3G21830
Arabidopsis thaliana
1.5e-16
87.8
115
42.6
fso129040
Fistulifera solaris
2.0e-16
87.4
122
36.1
FBgn0031074
Drosophila melanogaster
3.8e-15
83.2
160
32.5
sya00G163660
Synedra acus
1.4e-14
81.3
81
55.6
fso129050
Fistulifera solaris
1.2e-13
78.2
94
41.5
WBGene00004812
Caenorhabditis elegans
7.8e-13
75.5
107
35.5
WBGene00004814
Caenorhabditis elegans
1.7e-12
74.3
118
37.3
WBGene00004816
Caenorhabditis elegans
5.1e-12
72.8
113
37.2
WBGene00004815
Caenorhabditis elegans
8.7e-12
72.0
120
35.8
WBGene00004818
Caenorhabditis elegans
8.7e-12
72.0
113
38.1
WBGene00004820
Caenorhabditis elegans
8.7e-12
72.0
103
37.9
WBGene00004813
Caenorhabditis elegans
8.7e-12
72.0
108
37.0
WBGene00004819
Caenorhabditis elegans
1.5e-11
71.2
113
38.1
sya00G14790
Synedra acus
3.3e-11
70.1
95
38.9
sya00G14800
Synedra acus
3.3e-11
70.1
95
38.9
ptri194260
Phaeodactylum tricornutum
5.6e-11
69.3
95
36.8
WBGene00004821
Caenorhabditis elegans
9.6e-11
68.6
113
34.5
AT2G20160
Arabidopsis thaliana
2.8e-10
67.0
117
34.2
ps00G79720
Pseudo-nitzschia multiseries
2.8e-10
67.0
139
32.4
ccr128460
Chondrus crispus
6.2e-10
65.9
112
29.5
pte687060
Paramecium tetraurelia
4.0e-09
63.2
115
32.2
Pp3c23_19260
Physcomitrella patens
1.2e-08
61.6
118
33.9
Naga_100725g3
Nannochloropsis gaditana
1.5e-08
61.2
113
31.0
AT3G53060
Arabidopsis thaliana
7.6e-08
58.9
77
42.9
Pp3c9_25390
Physcomitrella patens
9.9e-08
58.5
105
33.3
PSNMU-V1.4_AUG-EV-PASAV3_0074960
Pseudo-nitzschia multistriata
3.8e-07
56.6
127
29.1
WBGene00004826
Caenorhabditis elegans
8.4e-07
55.5
101
27.7
Pp3c14_22070
Physcomitrella patens
8.4e-07
55.5
113
34.5
pte183240
Paramecium tetraurelia
8.4e-07
55.5
115
32.2
AT3G61415
Arabidopsis thaliana
1.9e-06
54.3
110
30.0
WBGene00004822
Caenorhabditis elegans
4.2e-06
53.1
110
31.8
WBGene00004823
Caenorhabditis elegans
5.4e-06
52.8
99
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (17 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (19 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (13 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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