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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G129800
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G129800
Pseudo-nitzschia multiseries
0.0e+00
2346.6
1652
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0042980
Pseudo-nitzschia multistriata
0.0e+00
1326.6
1667
62.9
gene7984
Fragilariopsis cylindrus
0.0e+00
1197.2
1669
56.3
ptri145890
Phaeodactylum tricornutum
3.8e-151
538.1
694
44.2
sya00G205790
Synedra acus
6.7e-140
500.7
643
43.9
Sro397_g134490
Seminavis robusta
3.0e-132
475.3
716
38.4
sya00G02800
Synedra acus
8.0e-109
397.5
516
40.7
fso169300
Fistulifera solaris
1.1e-94
350.5
675
34.7
fso169150
Fistulifera solaris
1.2e-93
347.1
965
29.0
tps98320
Thalassiosira pseudonana
1.2e-88
330.5
539
37.5
CC00G94760
Cyclotella cryptica
6.6e-87
324.7
634
34.5
Sro1031_g233420
Seminavis robusta
6.9e-68
261.5
809
28.3
ENSG00000066279
Homo sapiens
3.2e-65
252.7
670
29.9
Ec-04_005040
Ectocarpus siliculosus
7.1e-65
251.5
671
30.1
tho158100
Thalassiosira oceanica
5.5e-57
225.3
367
35.7
Pp3c24_1350
Physcomitrella patens
5.1e-47
192.2
703
25.7
emh401500
Emiliania huxleyi
1.1e-44
184.5
599
27.7
ptri145910
Phaeodactylum tricornutum
1.1e-36
157.9
246
41.1
Naga_100044g28
Nannochloropsis gaditana
3.4e-35
152.9
373
28.7
FBgn0000140
Drosophila melanogaster
1.3e-34
151.0
303
33.0
sya00G02790
Synedra acus
9.7e-30
134.8
205
39.5
AT4G21820
Arabidopsis thaliana
3.8e-26
122.9
315
26.0
WBGene00008107
Caenorhabditis elegans
1.8e-15
87.4
298
24.8
Cre06.g281200
Chlamydomonas reinhardtii
1.8e-15
87.4
205
28.8
ENSG00000070182
Homo sapiens
6.5e-10
68.9
267
24.7
FBgn0004167
Drosophila melanogaster
1.5e-09
67.8
261
26.8
ENSG00000054654
Homo sapiens
4.2e-09
66.2
262
26.0
ENSG00000115306
Homo sapiens
4.2e-09
66.2
271
24.4
ENSG00000178209
Homo sapiens
4.7e-08
62.8
261
24.5
WBGene00000140
Caenorhabditis elegans
1.4e-07
61.2
407
22.1
ENSG00000160460
Homo sapiens
1.8e-07
60.8
269
23.0
SPAC15A10.08
Schizosaccharomyces pombe
4.0e-07
59.7
326
23.3
ENSG00000077522
Homo sapiens
8.8e-07
58.5
265
23.8
WBGene00000228
Caenorhabditis elegans
1.5e-06
57.8
262
24.0
tho181740
Thalassiosira oceanica
2.0e-06
57.4
262
24.0
WBGene00004855
Caenorhabditis elegans
2.6e-06
57.0
222
23.0
ENSG00000248746
Homo sapiens
2.6e-06
57.0
265
24.2
WBGene00022048
Caenorhabditis elegans
3.4e-06
56.6
270
22.6
WBGene00006803
Caenorhabditis elegans
5.7e-06
55.8
210
23.3
ENSG00000130402
Homo sapiens
5.7e-06
55.8
265
24.5
FBgn0250788
Drosophila melanogaster
9.8e-06
55.1
214
22.4
ENSG00000137877
Homo sapiens
9.8e-06
55.1
293
26.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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