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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G12920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G12920
Pseudo-nitzschia multiseries
6.0e-84
311.6
172
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0050130
Pseudo-nitzschia multistriata
1.0e-78
294.3
144
95.1
gene13698
Fragilariopsis cylindrus
4.5e-63
242.3
138
82.6
CC00G146110
Cyclotella cryptica
2.3e-59
229.9
144
73.6
ptri176990
Phaeodactylum tricornutum
3.7e-57
222.6
144
69.4
tps01320
Thalassiosira pseudonana
5.3e-56
218.8
142
70.4
Sro126_g060630
Seminavis robusta
6.5e-54
211.8
144
68.1
fso39700
Fistulifera solaris
3.3e-50
199.5
142
66.2
fso109630
Fistulifera solaris
2.8e-49
196.4
142
65.5
ptri229970
Phaeodactylum tricornutum
1.8e-48
193.7
143
65.0
tho38320
Thalassiosira oceanica
4.1e-48
192.6
143
64.3
fso64260
Fistulifera solaris
5.3e-48
192.2
146
65.8
fso99600
Fistulifera solaris
9.1e-48
191.4
146
65.1
gene18232
Fragilariopsis cylindrus
4.5e-47
189.1
143
65.0
Sro174_g076640
Seminavis robusta
2.9e-46
186.4
144
63.2
fso129470
Fistulifera solaris
3.8e-46
186.0
144
63.9
fso53830
Fistulifera solaris
5.0e-46
185.7
144
63.2
sya00G56360
Synedra acus
8.5e-46
184.9
142
62.7
Sro20_g014070
Seminavis robusta
2.5e-45
183.3
142
61.3
CC00G49800
Cyclotella cryptica
4.2e-45
182.6
142
62.0
ps00G84740
Pseudo-nitzschia multiseries
2.1e-44
180.3
147
61.9
ptri18330
Phaeodactylum tricornutum
6.1e-44
178.7
142
59.9
tho161400
Thalassiosira oceanica
8.0e-44
178.3
142
61.3
Ec-03_001810
Ectocarpus siliculosus
1.0e-43
177.9
141
59.6
Naga_100017g70
Nannochloropsis gaditana
5.2e-43
175.6
146
61.6
PSNMU-V1.4_AUG-EV-PASAV3_0099320
Pseudo-nitzschia multistriata
5.2e-43
175.6
142
60.6
PSNMU-V1.4_AUG-EV-PASAV3_0016650
Pseudo-nitzschia multistriata
2.6e-42
173.3
148
56.8
tps84810
Thalassiosira pseudonana
9.8e-42
171.4
139
59.0
CC00G119710
Cyclotella cryptica
4.8e-41
169.1
139
56.1
sya00G258880
Synedra acus
1.4e-40
167.5
146
57.5
gene1306
Fragilariopsis cylindrus
1.5e-37
157.5
142
51.4
Sro555_g165630
Seminavis robusta
1.5e-37
157.5
142
55.6
tho59920
Thalassiosira oceanica
1.9e-37
157.1
141
52.5
tps09680
Thalassiosira pseudonana
1.9e-37
157.1
140
52.9
AA0005G01990
Aureococcus anophagefferens
1.8e-35
150.6
143
55.2
ptri157070
Phaeodactylum tricornutum
2.3e-35
150.2
140
50.7
sya00G124130
Synedra acus
4.0e-35
149.4
140
50.7
gene9950
Fragilariopsis cylindrus
5.2e-35
149.1
147
49.7
sya00G80910
Synedra acus
5.2e-35
149.1
149
52.3
ps00G106110
Pseudo-nitzschia multiseries
1.2e-34
147.9
140
50.7
sya00G221550
Synedra acus
1.2e-34
147.9
149
52.3
fso169970
Fistulifera solaris
2.0e-34
147.1
139
54.0
PSNMU-V1.4_AUG-EV-PASAV3_0082870
Pseudo-nitzschia multistriata
2.6e-34
146.7
140
48.6
Cre02.g087950
Chlamydomonas reinhardtii
1.3e-33
144.4
144
52.1
Pp3c15_24000
Physcomitrella patens
1.3e-33
144.4
141
51.1
emh613500
Emiliania huxleyi
2.2e-33
143.7
144
51.4
ps00G08000
Pseudo-nitzschia multiseries
2.2e-33
143.7
143
49.7
AA0016G00770
Aureococcus anophagefferens
2.8e-33
143.3
129
56.6
Sro625_g177520
Seminavis robusta
2.8e-33
143.3
149
47.7
Ec-18_004570
Ectocarpus siliculosus
6.3e-33
142.1
141
50.4
gene678
Fragilariopsis cylindrus
6.3e-33
142.1
147
51.0
fso84340
Fistulifera solaris
6.3e-33
142.1
139
52.5
Cre01.g046652
Chlamydomonas reinhardtii
1.4e-32
141.0
144
50.0
Pp3c3_5590
Physcomitrella patens
1.8e-32
140.6
142
50.0
ptri109240
Phaeodactylum tricornutum
1.8e-32
140.6
147
46.3
tps33260
Thalassiosira pseudonana
3.1e-32
139.8
147
49.0
FBgn0027080
Drosophila melanogaster
4.1e-32
139.4
138
52.2
CC00G11570
Cyclotella cryptica
5.4e-32
139.0
147
49.7
emh490140
Emiliania huxleyi
5.4e-32
139.0
100
64.0
Pp3c13_2300
Physcomitrella patens
7.0e-32
138.7
142
49.3
AA0014G01570
Aureococcus anophagefferens
1.2e-31
137.9
141
48.9
tho368780
Thalassiosira oceanica
1.2e-31
137.9
147
49.0
Naga_100028g2
Nannochloropsis gaditana
1.6e-31
137.5
147
49.7
Cre03.g145967
Chlamydomonas reinhardtii
3.5e-31
136.3
143
47.6
PSNMU-V1.4_AUG-EV-PASAV3_0031310
Pseudo-nitzschia multistriata
1.0e-30
134.8
147
46.3
fso71400
Fistulifera solaris
2.3e-30
133.7
147
45.6
fso190180
Fistulifera solaris
2.3e-30
133.7
147
45.6
pte272170
Paramecium tetraurelia
3.8e-30
132.9
142
52.8
AT2G40660
Arabidopsis thaliana
5.0e-30
132.5
143
48.3
Pp3c25_15060
Physcomitrella patens
1.9e-29
130.6
139
48.9
Naga_100004g19
Nannochloropsis gaditana
3.3e-29
129.8
143
48.3
gsu103970
Galdieria sulphuraria
5.5e-29
129.0
142
46.5
gsu100370
Galdieria sulphuraria
7.2e-29
128.6
140
46.4
gsu100390
Galdieria sulphuraria
7.2e-29
128.6
140
46.4
AT3G59980
Arabidopsis thaliana
9.5e-29
128.3
143
47.6
FBgn0033351
Drosophila melanogaster
2.1e-28
127.1
143
46.2
AA0012G00350
Aureococcus anophagefferens
1.0e-27
124.8
142
47.2
WBGene00003415
Caenorhabditis elegans
2.3e-27
123.6
143
44.8
AT4G13780
Arabidopsis thaliana
3.0e-27
123.2
141
46.1
ENSG00000164022
Homo sapiens
6.8e-27
122.1
143
42.0
emh427310
Emiliania huxleyi
1.5e-26
120.9
134
44.8
ENSG00000134684
Homo sapiens
1.5e-26
120.9
142
45.8
Cre08.g364650
Chlamydomonas reinhardtii
4.4e-26
119.4
139
43.9
Ec-09_002760
Ectocarpus siliculosus
2.3e-22
107.1
114
45.6
Ec-17_003170
Ectocarpus siliculosus
5.0e-22
105.9
154
39.0
YGL105W
Saccharomyces cerevisiae strain S288C
1.9e-21
104.0
141
39.0
SPAC30C2.04
Schizosaccharomyces pombe
2.5e-21
103.6
142
37.3
ps00G90130
Pseudo-nitzschia multiseries
7.3e-21
102.1
95
53.7
CM04G00770
Cyanidioschyzon merolae
9.5e-21
101.7
144
41.7
CM09G00420
Cyanidioschyzon merolae
1.2e-20
101.3
143
42.0
emh675260
Emiliania huxleyi
2.4e-16
87.0
105
45.7
emh202630
Emiliania huxleyi
2.4e-16
87.0
105
45.7
Pp3c1_5820
Physcomitrella patens
1.6e-15
84.3
132
36.4
ccr71920
Chondrus crispus
3.5e-15
83.2
104
41.3
tho156480
Thalassiosira oceanica
1.3e-14
81.3
149
33.6
ccr155740
Chondrus crispus
1.7e-14
80.9
139
33.1
emh57480
Emiliania huxleyi
2.3e-14
80.5
102
42.2
AA0002G06540
Aureococcus anophagefferens
2.5e-13
77.0
104
43.3
fso35220
Fistulifera solaris
8.1e-12
72.0
122
32.8
gene12078
Fragilariopsis cylindrus
1.8e-11
70.9
133
30.1
Sro110_g054990
Seminavis robusta
2.3e-11
70.5
150
31.3
Cre07.g326950
Chlamydomonas reinhardtii
3.1e-11
70.1
139
33.8
fso29000
Fistulifera solaris
1.2e-10
68.2
122
32.8
ps00G189580
Pseudo-nitzschia multiseries
1.2e-10
68.2
153
28.1
gsu101030
Galdieria sulphuraria
1.5e-10
67.8
78
41.0
gsu101050
Galdieria sulphuraria
1.5e-10
67.8
78
41.0
CC00G36090
Cyclotella cryptica
2.6e-10
67.0
144
30.6
gene18729
Fragilariopsis cylindrus
3.4e-10
66.6
152
28.9
PSNMU-V1.4_AUG-EV-PASAV3_0018750
Pseudo-nitzschia multistriata
3.4e-10
66.6
153
27.5
ptri04920
Phaeodactylum tricornutum
2.9e-09
63.5
133
32.3
sya00G196850
Synedra acus
6.4e-09
62.4
143
28.0
tho64940
Thalassiosira oceanica
6.4e-09
62.4
43
69.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (6 genes)
Fistulifera solaris (12 genes)
Fragilariopsis cylindrus (7 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (6 genes)
Synedra acus (6 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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