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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G112390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G112390
Pseudo-nitzschia multiseries
4.6e-212
738.8
521
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0105680
Pseudo-nitzschia multistriata
9.5e-173
608.2
383
81.5
gene428
Fragilariopsis cylindrus
1.9e-165
583.9
383
78.3
Sro103_g052460
Seminavis robusta
3.2e-112
407.1
385
55.1
tho121140
Thalassiosira oceanica
4.3e-109
396.7
354
57.3
tps27090
Thalassiosira pseudonana
5.6e-109
396.4
363
54.0
ptri125300
Phaeodactylum tricornutum
1.2e-106
388.7
366
54.1
CC00G44130
Cyclotella cryptica
5.8e-106
386.3
365
54.0
fso134580
Fistulifera solaris
1.4e-104
381.7
358
56.4
fso00590
Fistulifera solaris
1.9e-104
381.3
358
56.4
sya00G85070
Synedra acus
2.1e-103
377.9
359
62.7
Ec-28_000800
Ectocarpus siliculosus
1.7e-92
341.7
343
55.4
PSNMU-V1.4_AUG-EV-PASAV3_0095480
Pseudo-nitzschia multistriata
3.9e-86
320.5
363
47.1
Ec-16_002010
Ectocarpus siliculosus
5.7e-85
316.6
362
46.1
Pp3c24_8550
Physcomitrella patens
1.4e-83
312.0
338
48.2
Pp3c21_3140
Physcomitrella patens
1.0e-81
305.8
358
47.8
Pp3c8_6330
Physcomitrella patens
2.2e-81
304.7
334
48.5
Pp3c2_10200
Physcomitrella patens
5.0e-81
303.5
337
47.8
Sro589_g171680
Seminavis robusta
1.4e-80
302.0
344
47.7
ps00G28970
Pseudo-nitzschia multiseries
3.2e-80
300.8
348
46.8
tps65250
Thalassiosira pseudonana
5.5e-80
300.1
344
46.2
gene13157
Fragilariopsis cylindrus
3.6e-79
297.4
358
45.8
gsu96170
Galdieria sulphuraria
8.0e-79
296.2
337
47.2
CC00G57940
Cyclotella cryptica
2.3e-78
294.7
343
46.1
AT4G33260
Arabidopsis thaliana
3.7e-76
287.3
331
45.9
AT4G33270
Arabidopsis thaliana
3.7e-76
287.3
331
45.9
ptri242330
Phaeodactylum tricornutum
1.6e-74
282.0
336
44.6
sya00G265990
Synedra acus
1.6e-74
282.0
342
44.7
AA0001G03340
Aureococcus anophagefferens
5.0e-73
276.9
354
43.5
FBgn0001086
Drosophila melanogaster
1.1e-72
275.8
332
44.3
AT4G22910
Arabidopsis thaliana
3.2e-72
274.2
353
41.4
ENSG00000117399
Homo sapiens
7.2e-72
273.1
336
43.5
Cre09.g399911
Chlamydomonas reinhardtii
1.2e-71
272.3
345
43.8
Pp3c1_28980
Physcomitrella patens
1.6e-71
271.9
312
47.4
AT4G11920
Arabidopsis thaliana
3.6e-71
270.8
353
41.6
Cre09.g406851
Chlamydomonas reinhardtii
4.7e-71
270.4
348
41.4
Pp3c12_23740
Physcomitrella patens
1.0e-70
269.2
369
40.9
AT5G27570
Arabidopsis thaliana
1.4e-70
268.9
335
44.2
Pp3c4_1710
Physcomitrella patens
1.4e-70
268.9
350
41.7
Pp3c3_34000
Physcomitrella patens
3.0e-70
267.7
369
40.7
AT5G26900
Arabidopsis thaliana
5.7e-69
263.5
334
43.1
AT5G27080
Arabidopsis thaliana
9.7e-69
262.7
335
43.6
ENSG00000105325
Homo sapiens
2.2e-68
261.5
353
40.2
SPAC144.13c
Schizosaccharomyces pombe
7.0e-67
256.5
339
40.7
FBgn0262699
Drosophila melanogaster
9.1e-67
256.1
347
39.2
Pp3c10_18160
Physcomitrella patens
1.2e-66
255.8
370
39.7
AT5G13840
Arabidopsis thaliana
2.0e-66
255.0
345
40.3
pte306690
Paramecium tetraurelia
4.5e-66
253.8
352
40.3
fso78880
Fistulifera solaris
7.7e-66
253.1
346
41.0
emh414940
Emiliania huxleyi
2.2e-65
251.5
323
42.7
fso162020
Fistulifera solaris
2.9e-65
251.1
346
40.8
Naga_100023g51
Nannochloropsis gaditana
8.5e-65
249.6
338
39.3
SPBC1198.12
Schizosaccharomyces pombe
7.2e-64
246.5
355
37.2
CM01G01380
Cyanidioschyzon merolae
2.1e-63
245.0
358
43.3
Pp3c21_3130
Physcomitrella patens
3.6e-63
244.2
288
47.6
gsu94560
Galdieria sulphuraria
6.1e-63
243.4
349
42.7
CM17G02420
Cyanidioschyzon merolae
8.0e-63
243.0
329
40.1
pte472800
Paramecium tetraurelia
8.8e-62
239.6
329
40.4
fso195350
Fistulifera solaris
1.5e-61
238.8
342
38.6
tps150750
Thalassiosira pseudonana
2.0e-61
238.4
351
38.7
WBGene00001510
Caenorhabditis elegans
3.4e-61
237.7
345
37.7
fso139640
Fistulifera solaris
4.4e-61
237.3
344
38.4
SPAC821.08c
Schizosaccharomyces pombe
1.8e-59
231.9
328
36.6
Pp3c21_1630
Physcomitrella patens
9.1e-59
229.6
297
42.8
pte348600
Paramecium tetraurelia
1.7e-57
225.3
334
36.5
FBgn0034937
Drosophila melanogaster
2.3e-57
224.9
330
36.7
pte392450
Paramecium tetraurelia
6.5e-57
223.4
334
36.2
pte293100
Paramecium tetraurelia
1.1e-56
222.6
336
36.0
pte611220
Paramecium tetraurelia
9.5e-56
219.5
336
35.4
emh662650
Emiliania huxleyi
1.2e-55
219.2
343
38.8
YGL003C
Saccharomyces cerevisiae strain S288C
1.2e-55
219.2
326
36.5
AT5G27945
Arabidopsis thaliana
2.1e-55
218.4
303
40.9
fso159790
Fistulifera solaris
2.2e-52
208.4
370
33.2
fso92980
Fistulifera solaris
3.7e-52
207.6
378
34.7
fso159510
Fistulifera solaris
1.6e-50
202.2
362
34.5
pte291360
Paramecium tetraurelia
2.7e-50
201.4
324
35.5
pte613120
Paramecium tetraurelia
2.7e-50
201.4
324
35.5
pte693190
Paramecium tetraurelia
5.9e-50
200.3
326
35.6
pte748280
Paramecium tetraurelia
1.3e-49
199.1
327
38.8
gene2402
Fragilariopsis cylindrus
1.7e-49
198.7
330
38.8
pte658260
Paramecium tetraurelia
1.7e-49
198.7
343
37.6
fso93020
Fistulifera solaris
1.9e-48
195.3
360
33.3
CC00G30990
Cyclotella cryptica
4.3e-48
194.1
349
37.8
Sro1101_g241450
Seminavis robusta
9.5e-48
193.0
332
38.6
fso36200
Fistulifera solaris
1.6e-47
192.2
368
34.0
AA0003G01010
Aureococcus anophagefferens
8.0e-47
189.9
344
35.2
sya00G23420
Synedra acus
1.0e-46
189.5
330
38.2
emh174370
Emiliania huxleyi
5.2e-46
187.2
313
36.7
fso159730
Fistulifera solaris
8.9e-46
186.4
364
33.0
YGL116W
Saccharomyces cerevisiae strain S288C
4.6e-42
174.1
345
31.6
pte503430
Paramecium tetraurelia
6.0e-42
173.7
367
29.2
emh343840
Emiliania huxleyi
7.8e-42
173.3
232
42.2
pte506460
Paramecium tetraurelia
3.9e-41
171.0
349
29.5
pte749100
Paramecium tetraurelia
1.1e-40
169.5
328
32.9
pte673500
Paramecium tetraurelia
3.3e-40
167.9
358
29.3
pte707680
Paramecium tetraurelia
1.2e-39
166.0
330
33.3
pte251190
Paramecium tetraurelia
8.0e-39
163.3
328
40.9
pte414460
Paramecium tetraurelia
8.0e-39
163.3
330
33.0
ccr191300
Chondrus crispus
8.9e-38
159.8
243
39.1
pte592600
Paramecium tetraurelia
8.9e-38
159.8
353
38.0
pte383100
Paramecium tetraurelia
1.2e-37
159.5
328
40.5
pte712080
Paramecium tetraurelia
1.5e-37
159.1
328
39.3
fso36170
Fistulifera solaris
4.1e-35
151.0
140
48.6
emh289720
Emiliania huxleyi
1.6e-34
149.1
243
37.0
Naga_100321g1
Nannochloropsis gaditana
2.1e-34
148.7
190
42.1
ps00G182890
Pseudo-nitzschia multiseries
2.7e-34
148.3
342
33.3
fso36260
Fistulifera solaris
3.5e-34
147.9
141
47.5
ENSG00000164287
Homo sapiens
3.5e-34
147.9
317
29.7
emh32870
Emiliania huxleyi
6.2e-31
137.1
150
50.7
pte708930
Paramecium tetraurelia
8.1e-31
136.7
321
33.3
PSNMU-V1.4_AUG-EV-PASAV3_0043280
Pseudo-nitzschia multistriata
1.1e-30
136.3
330
32.4
ptri146850
Phaeodactylum tricornutum
2.3e-30
135.2
337
32.3
sya00G43700
Synedra acus
2.0e-29
132.1
341
30.8
emh447100
Emiliania huxleyi
1.3e-28
129.4
339
33.0
tps22280
Thalassiosira pseudonana
5.4e-27
124.0
335
31.9
tps39620
Thalassiosira pseudonana
5.4e-27
124.0
335
31.9
AA0106G00010
Aureococcus anophagefferens
2.7e-26
121.7
81
69.1
pte07750
Paramecium tetraurelia
3.0e-25
118.2
136
46.3
SPCC1620.04c
Schizosaccharomyces pombe
3.9e-25
117.9
347
28.8
YGR225W
Saccharomyces cerevisiae strain S288C
5.2e-22
107.5
346
25.7
SPAC13G6.08
Schizosaccharomyces pombe
4.4e-21
104.4
351
25.4
ptri143190
Phaeodactylum tricornutum
4.2e-19
97.8
312
28.2
emh343860
Emiliania huxleyi
1.2e-18
96.3
107
43.0
pte415590
Paramecium tetraurelia
1.7e-17
92.4
131
42.0
pte415610
Paramecium tetraurelia
2.3e-17
92.0
78
51.3
WBGene00001511
Caenorhabditis elegans
6.6e-17
90.5
368
24.7
ccr147000
Chondrus crispus
3.3e-16
88.2
128
37.5
Pp3c18_20650
Physcomitrella patens
7.3e-16
87.0
92
48.9
fso159480
Fistulifera solaris
1.1e-14
83.2
113
40.7
fso120220
Fistulifera solaris
1.5e-13
79.3
146
32.2
fso92960
Fistulifera solaris
3.8e-12
74.7
161
32.3
fso159430
Fistulifera solaris
1.4e-11
72.8
157
31.2
AT1G53090
Arabidopsis thaliana
5.6e-08
60.8
125
28.8
Cre06.g255400
Chlamydomonas reinhardtii
9.6e-08
60.1
149
24.8
Cre12.g526950
Chlamydomonas reinhardtii
2.8e-07
58.5
138
29.7
AT3G21540
Arabidopsis thaliana
2.4e-06
55.5
120
27.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (18 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (11 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (25 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing