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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G109810
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G109810
Pseudo-nitzschia multiseries
3.0e-87
322.4
149
100.0
ps00G79480
Pseudo-nitzschia multiseries
7.8e-80
297.7
149
90.6
PSNMU-V1.4_AUG-EV-PASAV3_0022040
Pseudo-nitzschia multistriata
1.6e-64
246.9
149
74.5
PSNMU-V1.4_AUG-EV-PASAV3_0089660
Pseudo-nitzschia multistriata
2.7e-64
246.1
149
73.2
PSNMU-V1.4_AUG-EV-PASAV3_0020960
Pseudo-nitzschia multistriata
4.6e-64
245.4
149
73.2
ps00G11210
Pseudo-nitzschia multiseries
1.3e-53
210.7
150
65.3
gene3462
Fragilariopsis cylindrus
5.5e-41
168.7
149
57.0
ps00G160950
Pseudo-nitzschia multiseries
3.9e-39
162.5
109
67.0
CC00G56080
Cyclotella cryptica
1.0e-18
94.7
134
40.3
tho139880
Thalassiosira oceanica
2.2e-18
93.6
127
38.6
tho158000
Thalassiosira oceanica
2.2e-18
93.6
127
38.6
tho418560
Thalassiosira oceanica
5.0e-18
92.4
133
39.1
CC00G68530
Cyclotella cryptica
8.5e-18
91.7
134
40.3
CC00G07980
Cyclotella cryptica
1.1e-17
91.3
132
40.2
CC00G118720
Cyclotella cryptica
1.5e-17
90.9
134
40.3
CC00G159220
Cyclotella cryptica
5.5e-17
89.0
134
39.6
tho59300
Thalassiosira oceanica
5.5e-17
89.0
133
36.8
tho163240
Thalassiosira oceanica
7.2e-17
88.6
135
37.8
CC00G151980
Cyclotella cryptica
9.4e-17
88.2
134
37.3
CC00G139380
Cyclotella cryptica
4.7e-16
85.9
134
38.8
CC00G210670
Cyclotella cryptica
6.1e-16
85.5
132
39.4
tho26600
Thalassiosira oceanica
3.0e-15
83.2
131
36.6
ps00G113060
Pseudo-nitzschia multiseries
1.5e-14
80.9
64
54.7
fso12240
Fistulifera solaris
2.4e-12
73.6
147
27.2
gene13679
Fragilariopsis cylindrus
3.6e-08
59.7
64
50.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (8 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing