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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G03390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G03390
Pseudo-nitzschia multiseries
1.1e-268
926.8
468
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0107490
Pseudo-nitzschia multistriata
1.9e-244
846.3
468
90.2
Sro295_g110450
Seminavis robusta
5.9e-166
585.5
487
62.4
ptri191180
Phaeodactylum tricornutum
5.9e-158
558.9
478
60.0
fso169480
Fistulifera solaris
3.6e-155
549.7
478
60.9
tho124860
Thalassiosira oceanica
3.0e-154
546.6
504
57.1
fso18520
Fistulifera solaris
1.7e-152
540.8
478
59.8
tps93440
Thalassiosira pseudonana
6.1e-139
495.7
514
51.6
sya00G136610
Synedra acus
5.2e-138
492.7
435
56.6
CC00G36440
Cyclotella cryptica
4.9e-136
486.1
501
53.5
gene5897
Fragilariopsis cylindrus
1.9e-132
474.2
277
85.6
gene11979
Fragilariopsis cylindrus
4.6e-110
399.8
235
83.8
Ec-12_004310
Ectocarpus siliculosus
4.0e-106
386.7
471
45.4
Naga_100147g19
Nannochloropsis gaditana
1.5e-84
315.1
487
40.5
gsu101450
Galdieria sulphuraria
7.0e-34
146.7
491
30.5
CM08G02730
Cyanidioschyzon merolae
2.3e-29
131.7
344
31.1
Cre06.g293051
Chlamydomonas reinhardtii
1.4e-26
122.5
335
33.1
AT2G47970
Arabidopsis thaliana
1.3e-24
115.9
306
31.7
AT3G63000
Arabidopsis thaliana
1.7e-24
115.5
306
30.7
Pp3c4_25410
Physcomitrella patens
1.5e-23
112.5
310
29.4
ENSG00000182446
Homo sapiens
3.3e-15
84.7
305
27.5
FBgn0039348
Drosophila melanogaster
1.4e-13
79.3
274
28.8
pte139770
Paramecium tetraurelia
4.4e-12
74.3
274
27.4
pte76570
Paramecium tetraurelia
5.8e-12
73.9
274
27.0
YBR170C
Saccharomyces cerevisiae strain S288C
8.3e-11
70.1
322
23.9
Ec-02_003900
Ectocarpus siliculosus
1.1e-10
69.7
325
26.5
WBGene00019121
Caenorhabditis elegans
1.6e-09
65.9
195
30.3
WBGene00019120
Caenorhabditis elegans
1.6e-09
65.9
195
30.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing