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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu92410
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu92410
Galdieria sulphuraria
4.1e-179
628.6
316
100.0
gsu43720
Galdieria sulphuraria
3.2e-30
134.0
301
33.2
gsu104950
Galdieria sulphuraria
1.2e-29
132.1
148
48.6
gsu141850
Galdieria sulphuraria
1.1e-17
92.4
155
36.8
gsu25290
Galdieria sulphuraria
2.2e-15
84.7
234
29.9
gsu141950
Galdieria sulphuraria
2.7e-13
77.8
285
25.6
gsu27370
Galdieria sulphuraria
1.1e-09
65.9
52
51.9
gsu23220
Galdieria sulphuraria
5.3e-09
63.5
168
29.2
AA0005G01700
Aureococcus anophagefferens
1.2e-08
62.4
48
47.9
AT1G72220
Arabidopsis thaliana
1.2e-08
62.4
60
46.7
gsu141830
Galdieria sulphuraria
1.5e-08
62.0
43
48.8
pte676370
Paramecium tetraurelia
2.0e-08
61.6
93
32.3
AT1G63170
Arabidopsis thaliana
2.6e-08
61.2
60
41.7
AT5G66160
Arabidopsis thaliana
2.6e-08
61.2
47
53.2
AT1G17970
Arabidopsis thaliana
7.6e-08
59.7
50
42.0
pte623100
Paramecium tetraurelia
7.6e-08
59.7
69
34.8
AT4G10150
Arabidopsis thaliana
9.9e-08
59.3
119
31.9
AT1G72310
Arabidopsis thaliana
1.3e-07
58.9
110
32.7
ENSG00000131263
Homo sapiens
1.3e-07
58.9
48
45.8
ps00G89230
Pseudo-nitzschia multiseries
1.3e-07
58.9
59
44.1
AT5G10380
Arabidopsis thaliana
1.7e-07
58.5
87
37.9
FBgn0037442
Drosophila melanogaster
1.7e-07
58.5
65
41.5
Ec-05_006410
Ectocarpus siliculosus
1.7e-07
58.5
54
40.7
Ec-05_006400
Ectocarpus siliculosus
1.7e-07
58.5
54
40.7
pte783360
Paramecium tetraurelia
1.7e-07
58.5
69
33.3
sya00G207190
Synedra acus
1.7e-07
58.5
129
27.9
fso64340
Fistulifera solaris
2.2e-07
58.2
112
32.1
fso159830
Fistulifera solaris
2.2e-07
58.2
83
38.6
pte500980
Paramecium tetraurelia
2.2e-07
58.2
76
32.9
AT1G12760
Arabidopsis thaliana
2.9e-07
57.8
53
41.5
Ec-26_006260
Ectocarpus siliculosus
2.9e-07
57.8
81
30.9
ENSG00000127870
Homo sapiens
2.9e-07
57.8
54
42.6
AT3G48030
Arabidopsis thaliana
3.8e-07
57.4
58
46.6
gsu120780
Galdieria sulphuraria
3.8e-07
57.4
64
39.1
AT5G01980
Arabidopsis thaliana
4.9e-07
57.0
57
38.6
AT1G80400
Arabidopsis thaliana
6.4e-07
56.6
61
41.0
AT3G60220
Arabidopsis thaliana
6.4e-07
56.6
118
33.1
fso99680
Fistulifera solaris
6.4e-07
56.6
116
32.8
gsu76720
Galdieria sulphuraria
6.4e-07
56.6
136
28.7
ENSG00000133874
Homo sapiens
6.4e-07
56.6
63
42.9
Pp3c6_7790
Physcomitrella patens
6.4e-07
56.6
123
33.3
CM09G01440
Cyanidioschyzon merolae
8.4e-07
56.2
112
33.9
sya00G81370
Synedra acus
8.4e-07
56.2
64
37.5
AT1G71980
Arabidopsis thaliana
1.1e-06
55.8
64
45.3
AT4G30400
Arabidopsis thaliana
1.1e-06
55.8
82
43.9
Ec-09_000080
Ectocarpus siliculosus
1.1e-06
55.8
49
51.0
Ec-27_007010
Ectocarpus siliculosus
1.1e-06
55.8
46
45.7
fso36130
Fistulifera solaris
1.1e-06
55.8
75
41.3
Pp3c1_32230
Physcomitrella patens
1.1e-06
55.8
50
48.0
AT4G32600
Arabidopsis thaliana
1.4e-06
55.5
63
39.7
Ec-08_004670
Ectocarpus siliculosus
1.4e-06
55.5
48
43.8
ENSG00000108523
Homo sapiens
1.4e-06
55.5
61
37.7
AT2G35000
Arabidopsis thaliana
1.9e-06
55.1
58
44.8
Cre13.g580750
Chlamydomonas reinhardtii
1.9e-06
55.1
52
38.5
Cre16.g680117
Chlamydomonas reinhardtii
1.9e-06
55.1
47
42.6
ENSG00000105428
Homo sapiens
1.9e-06
55.1
59
35.6
pte32620
Paramecium tetraurelia
1.9e-06
55.1
66
33.3
ptri179290
Phaeodactylum tricornutum
1.9e-06
55.1
52
44.2
AT3G05200
Arabidopsis thaliana
2.4e-06
54.7
42
54.8
fso174720
Fistulifera solaris
2.4e-06
54.7
70
37.1
ENSG00000101236
Homo sapiens
2.4e-06
54.7
67
41.8
ENSG00000082996
Homo sapiens
2.4e-06
54.7
47
44.7
Naga_100152g8
Nannochloropsis gaditana
2.4e-06
54.7
46
43.5
Pp3c13_19370
Physcomitrella patens
2.4e-06
54.7
66
36.4
sya00G191940
Synedra acus
2.4e-06
54.7
54
42.6
AA0004G02410
Aureococcus anophagefferens
3.2e-06
54.3
64
35.9
AT4G11680
Arabidopsis thaliana
3.2e-06
54.3
44
50.0
Cre04.g217922
Chlamydomonas reinhardtii
3.2e-06
54.3
48
41.7
Pp3c14_14600
Physcomitrella patens
3.2e-06
54.3
47
48.9
Pp3c26_7240
Physcomitrella patens
3.2e-06
54.3
58
39.7
tho359900
Thalassiosira oceanica
3.2e-06
54.3
41
48.8
AT1G35330
Arabidopsis thaliana
4.2e-06
53.9
46
47.8
AT3G47990
Arabidopsis thaliana
4.2e-06
53.9
107
35.5
AT5G27420
Arabidopsis thaliana
4.2e-06
53.9
42
54.8
WBGene00023404
Caenorhabditis elegans
4.2e-06
53.9
79
34.2
CM19G00950
Cyanidioschyzon merolae
4.2e-06
53.9
81
33.3
emh324960
Emiliania huxleyi
4.2e-06
53.9
45
44.4
Ec-24_001940
Ectocarpus siliculosus
4.2e-06
53.9
68
38.2
fso66510
Fistulifera solaris
4.2e-06
53.9
64
34.4
ENSG00000141622
Homo sapiens
4.2e-06
53.9
50
38.0
PSNMU-V1.4_AUG-EV-PASAV3_0047720
Pseudo-nitzschia multistriata
4.2e-06
53.9
45
51.1
sya00G206230
Synedra acus
4.2e-06
53.9
61
39.3
AA0006G05410
Aureococcus anophagefferens
5.4e-06
53.5
49
44.9
AT1G22670
Arabidopsis thaliana
5.4e-06
53.5
64
42.2
CM13G02360
Cyanidioschyzon merolae
5.4e-06
53.5
108
27.8
AT5G56340
Arabidopsis thaliana
7.1e-06
53.1
75
34.7
FBgn0004919
Drosophila melanogaster
7.1e-06
53.1
52
38.5
Ec-12_006580
Ectocarpus siliculosus
7.1e-06
53.1
46
45.7
ENSG00000113269
Homo sapiens
7.1e-06
53.1
41
46.3
Pp3c16_18860
Physcomitrella patens
7.1e-06
53.1
96
34.4
ptri35790
Phaeodactylum tricornutum
7.1e-06
53.1
45
42.2
sya00G118570
Synedra acus
7.1e-06
53.1
112
28.6
AT2G27940
Arabidopsis thaliana
9.3e-06
52.8
50
42.0
gsu103470
Galdieria sulphuraria
9.3e-06
52.8
41
51.2
Pp3c15_2690
Physcomitrella patens
9.3e-06
52.8
46
45.7
Pp3c20_11600
Physcomitrella patens
9.3e-06
52.8
78
38.5
Pp3c18_7100
Physcomitrella patens
9.3e-06
52.8
50
48.0
Pp3c4_17150
Physcomitrella patens
9.3e-06
52.8
58
39.7
Pp3c9_2330
Physcomitrella patens
9.3e-06
52.8
108
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (8 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (9 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (24 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (12 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (0 genes)
Synedra acus (5 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing