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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu85750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu85750
Galdieria sulphuraria
0.0e+00
1460.3
778
100.0
Pp3c24_16220
Physcomitrella patens
1.3e-98
362.5
763
31.8
AT5G06680
Arabidopsis thaliana
2.8e-96
354.8
775
31.2
Pp3c20_16750
Physcomitrella patens
6.3e-96
353.6
768
30.7
ENSG00000126216
Homo sapiens
3.0e-90
334.7
566
33.7
pte73500
Paramecium tetraurelia
7.5e-65
250.4
607
28.7
pte344330
Paramecium tetraurelia
2.8e-64
248.4
608
29.1
SPBC428.20c
Schizosaccharomyces pombe
8.3e-64
246.9
719
28.7
Cre11.g467745
Chlamydomonas reinhardtii
1.5e-57
226.1
624
26.6
FBgn0001612
Drosophila melanogaster
3.7e-56
221.5
580
26.6
pte263930
Paramecium tetraurelia
8.6e-53
210.3
614
24.4
pte316560
Paramecium tetraurelia
1.9e-52
209.1
570
25.4
emh763790
Emiliania huxleyi
5.6e-52
207.6
809
26.0
Naga_100060g14
Nannochloropsis gaditana
1.2e-51
206.5
440
30.5
Ec-01_012030
Ectocarpus siliculosus
1.2e-49
199.9
375
29.6
ptri173770
Phaeodactylum tricornutum
9.8e-49
196.8
608
26.0
ps00G07860
Pseudo-nitzschia multiseries
4.9e-48
194.5
620
25.6
fso25450
Fistulifera solaris
1.2e-46
189.9
661
26.9
fso116280
Fistulifera solaris
2.0e-46
189.1
649
26.8
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
6.6e-45
184.1
609
25.3
gene13257
Fragilariopsis cylindrus
1.6e-43
179.5
680
24.7
ENSG00000130640
Homo sapiens
9.2e-39
163.7
574
25.8
Pp3c23_1190
Physcomitrella patens
1.6e-38
162.9
585
24.6
AT5G17410
Arabidopsis thaliana
1.7e-37
159.5
571
24.7
Pp3c8_20000
Physcomitrella patens
2.5e-36
155.6
611
23.7
CC00G49290
Cyclotella cryptica
4.0e-34
148.3
557
24.8
Sro101_g051510
Seminavis robusta
4.0e-34
148.3
703
24.9
tps174470
Thalassiosira pseudonana
4.0e-34
148.3
618
23.8
gene13733
Fragilariopsis cylindrus
4.9e-32
141.4
603
23.2
sya00G96190
Synedra acus
5.4e-31
137.9
525
26.1
Pp3c13_20568
Physcomitrella patens
7.1e-31
137.5
613
23.7
Pp3c13_20560
Physcomitrella patens
7.1e-31
137.5
613
23.7
ps00G06430
Pseudo-nitzschia multiseries
2.7e-30
135.6
617
23.2
FBgn0026430
Drosophila melanogaster
3.0e-29
132.1
594
21.9
fso30500
Fistulifera solaris
4.7e-27
124.8
595
23.9
Sro50_g029000
Seminavis robusta
1.1e-26
123.6
637
23.4
fso119530
Fistulifera solaris
1.8e-26
122.9
595
24.9
sya00G73720
Synedra acus
6.8e-26
120.9
577
22.9
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
1.5e-25
119.8
610
21.1
pte710980
Paramecium tetraurelia
4.4e-25
118.2
588
21.4
gsu84670
Galdieria sulphuraria
1.7e-24
116.3
578
23.4
YNL126W
Saccharomyces cerevisiae strain S288C
4.9e-24
114.8
417
24.5
SPBC365.15
Schizosaccharomyces pombe
6.0e-22
107.8
635
21.1
ptri91750
Phaeodactylum tricornutum
7.8e-22
107.5
599
21.4
CC00G57600
Cyclotella cryptica
1.1e-20
103.6
593
21.8
tps159260
Thalassiosira pseudonana
4.3e-20
101.7
565
20.5
Naga_100001g52
Nannochloropsis gaditana
4.0e-18
95.1
661
22.1
Pp3c14_20420
Physcomitrella patens
6.9e-18
94.4
477
21.4
AT3G53760
Arabidopsis thaliana
9.9e-17
90.5
631
22.7
FBgn0026431
Drosophila melanogaster
2.2e-16
89.4
562
21.7
ENSG00000137822
Homo sapiens
6.6e-13
77.8
633
20.5
gsu132140
Galdieria sulphuraria
1.5e-12
76.6
562
22.6
Pp3c8_15910
Physcomitrella patens
9.6e-12
73.9
141
33.3
Ec-01_012010
Ectocarpus siliculosus
2.4e-10
69.3
149
26.2
AT1G80260
Arabidopsis thaliana
3.8e-08
62.0
279
24.7
ENSG00000275835
Homo sapiens
2.7e-06
55.8
271
22.5
ENSG00000276856
Homo sapiens
2.7e-06
55.8
271
22.5
Cre12.g525500
Chlamydomonas reinhardtii
3.5e-06
55.5
153
28.1
pte657980
Paramecium tetraurelia
4.6e-06
55.1
428
18.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing