Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu58970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu58970
Galdieria sulphuraria
1.3e-193
676.8
317
100.0
ENSG00000085415
Homo sapiens
1.4e-49
198.4
320
33.1
ptri164470
Phaeodactylum tricornutum
4.7e-42
173.3
315
34.0
tps215990
Thalassiosira pseudonana
7.6e-40
166.0
318
33.6
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Pseudo-nitzschia multistriata
1.1e-38
162.2
291
32.6
sya00G114070
Synedra acus
1.4e-38
161.8
352
29.5
YGL100W
Saccharomyces cerevisiae strain S288C
3.2e-38
160.6
348
28.4
SPAC15F9.02
Schizosaccharomyces pombe
2.1e-37
157.9
334
28.4
FBgn0033247
Drosophila melanogaster
1.0e-36
155.6
311
29.6
ps00G134570
Pseudo-nitzschia multiseries
8.6e-36
152.5
292
31.5
Sro909_g218970
Seminavis robusta
4.0e-33
143.7
360
28.6
Ec-07_003170
Ectocarpus siliculosus
4.4e-32
140.2
327
32.7
CC00G155200
Cyclotella cryptica
2.2e-31
137.9
315
30.8
fso166270
Fistulifera solaris
2.1e-29
131.3
301
30.9
fso62050
Fistulifera solaris
4.6e-29
130.2
310
30.6
FBgn0024509
Drosophila melanogaster
6.0e-29
129.8
314
28.3
Pp3c5_28960
Physcomitrella patens
8.7e-28
125.9
308
28.2
gsu79930
Galdieria sulphuraria
5.6e-27
123.2
323
27.6
Sro702_g189930
Seminavis robusta
1.8e-25
118.2
313
30.0
tps29610
Thalassiosira pseudonana
4.0e-25
117.1
306
29.1
fso129150
Fistulifera solaris
2.0e-24
114.8
320
30.3
pte460870
Paramecium tetraurelia
2.0e-24
114.8
298
25.2
WBGene00003804
Caenorhabditis elegans
3.4e-24
114.0
314
26.8
CC00G140360
Cyclotella cryptica
1.1e-22
109.0
304
27.6
Cre17.g715750
Chlamydomonas reinhardtii
7.1e-22
106.3
299
29.1
emh352120
Emiliania huxleyi
1.2e-21
105.5
314
25.8
Cre03.g192000
Chlamydomonas reinhardtii
2.1e-21
104.8
305
25.9
WBGene00003806
Caenorhabditis elegans
3.5e-21
104.0
297
26.9
fso53520
Fistulifera solaris
2.3e-20
101.3
320
28.8
AT1G64350
Arabidopsis thaliana
3.9e-20
100.5
307
22.8
AA0009G02590
Aureococcus anophagefferens
5.6e-19
96.7
307
26.1
CM10G01140
Cyanidioschyzon merolae
5.6e-19
96.7
349
25.2
Pp3c22_17920
Physcomitrella patens
6.9e-17
89.7
315
26.3
Pp3c19_12500
Physcomitrella patens
1.2e-16
89.0
307
25.7
pte445730
Paramecium tetraurelia
2.0e-16
88.2
189
30.2
ccr56640
Chondrus crispus
2.6e-16
87.8
256
27.3
Pp3c22_20020
Physcomitrella patens
2.6e-16
87.8
295
25.4
ptri231850
Phaeodactylum tricornutum
4.5e-16
87.0
311
24.8
Pp3c19_9370
Physcomitrella patens
9.9e-16
85.9
295
25.4
ps00G174630
Pseudo-nitzschia multiseries
8.4e-15
82.8
318
26.7
pte758460
Paramecium tetraurelia
1.9e-14
81.6
182
31.3
gene14464
Fragilariopsis cylindrus
1.2e-13
79.0
317
26.2
gene1572
Fragilariopsis cylindrus
1.6e-13
78.6
317
26.2
emh224540
Emiliania huxleyi
3.5e-13
77.4
74
47.3
sya00G144690
Synedra acus
4.6e-13
77.0
299
25.8
pte420310
Paramecium tetraurelia
6.0e-13
76.6
301
22.9
tho150740
Thalassiosira oceanica
6.0e-13
76.6
317
22.7
Naga_101101g1
Nannochloropsis gaditana
8.7e-12
72.8
137
32.1
Ec-12_007790
Ectocarpus siliculosus
4.0e-09
63.9
74
44.6
Naga_101320g1
Nannochloropsis gaditana
1.2e-08
62.4
87
39.1
PSNMU-V1.4_AUG-EV-PASAV3_0095210
Pseudo-nitzschia multistriata
2.0e-08
61.6
76
44.7
tho667320
Thalassiosira oceanica
5.8e-08
60.1
64
42.2
FBgn0263510
Drosophila melanogaster
4.2e-06
53.9
173
22.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing