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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu33910
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu33910
Galdieria sulphuraria
0.0e+00
1465.7
758
100.0
ccr35840
Chondrus crispus
2.1e-120
434.9
682
39.3
Naga_100003g182
Nannochloropsis gaditana
3.7e-101
370.9
709
34.4
CM18G02840
Cyanidioschyzon merolae
4.5e-99
364.0
705
36.3
emh393470
Emiliania huxleyi
6.5e-98
360.1
677
36.3
Sro2255_g320980
Seminavis robusta
1.8e-95
352.1
711
35.0
Cre05.g245158
Chlamydomonas reinhardtii
1.9e-89
332.0
695
32.7
ptri205340
Phaeodactylum tricornutum
1.9e-89
332.0
712
34.1
fso108500
Fistulifera solaris
3.6e-88
327.8
712
34.7
Cre24.g755097
Chlamydomonas reinhardtii
2.0e-86
322.0
652
33.0
fso50810
Fistulifera solaris
3.4e-86
321.2
712
34.3
sya00G99390
Synedra acus
3.7e-85
317.8
719
34.9
ps00G19360
Pseudo-nitzschia multiseries
1.2e-78
296.2
719
32.4
ccr35520
Chondrus crispus
7.0e-68
260.4
686
30.6
gsu125540
Galdieria sulphuraria
7.8e-67
256.9
697
29.1
tps62740
Thalassiosira pseudonana
1.3e-66
256.1
575
34.8
gene1531
Fragilariopsis cylindrus
6.4e-61
237.3
425
38.1
ps00G75480
Pseudo-nitzschia multiseries
6.8e-55
217.2
435
35.4
CM16G02370
Cyanidioschyzon merolae
8.9e-55
216.9
744
27.3
CC00G74500
Cyclotella cryptica
7.6e-54
213.8
519
32.0
Pp3c19_12470
Physcomitrella patens
1.3e-50
203.0
319
38.9
Pp3c22_13860
Physcomitrella patens
1.5e-49
199.5
319
37.9
emh66760
Emiliania huxleyi
4.3e-49
198.0
317
39.4
tho360740
Thalassiosira oceanica
1.3e-45
186.4
277
40.1
Pp3c17_16460
Physcomitrella patens
1.4e-44
183.0
313
37.4
Pp3c14_22160
Physcomitrella patens
1.9e-44
182.6
313
37.1
CM16G02270
Cyanidioschyzon merolae
9.3e-44
180.3
336
32.7
AT3G10350
Arabidopsis thaliana
1.2e-43
179.9
316
35.1
Sro118_g057890
Seminavis robusta
1.6e-43
179.5
328
38.4
tps111580
Thalassiosira pseudonana
3.5e-43
178.3
315
38.4
PSNMU-V1.4_AUG-EV-PASAV3_0012060
Pseudo-nitzschia multistriata
7.8e-43
177.2
330
37.0
ps00G14270
Pseudo-nitzschia multiseries
7.8e-43
177.2
330
36.7
AT5G60730
Arabidopsis thaliana
1.3e-42
176.4
321
35.2
gene16228
Fragilariopsis cylindrus
1.3e-42
176.4
336
36.6
gene4400
Fragilariopsis cylindrus
1.3e-42
176.4
336
36.6
AA0021G00090
Aureococcus anophagefferens
2.3e-42
175.6
252
38.9
Ec-26_002300
Ectocarpus siliculosus
3.9e-42
174.9
331
33.2
sya00G139290
Synedra acus
3.9e-42
174.9
355
35.8
CC00G158180
Cyclotella cryptica
5.1e-42
174.5
339
35.7
FBgn0033191
Drosophila melanogaster
6.2e-40
167.5
311
35.7
gsu73390
Galdieria sulphuraria
1.1e-39
166.8
323
32.5
ccr18600
Chondrus crispus
5.3e-39
164.5
321
31.5
ENSG00000198356
Homo sapiens
9.0e-39
163.7
316
36.4
pte321560
Paramecium tetraurelia
9.0e-39
163.7
315
34.3
AT1G01910
Arabidopsis thaliana
2.6e-38
162.2
313
33.9
pte128420
Paramecium tetraurelia
5.8e-38
161.0
307
34.5
SPAC1142.06
Schizosaccharomyces pombe
7.6e-38
160.6
312
36.5
ptri44910
Phaeodactylum tricornutum
1.7e-37
159.5
327
35.5
fso57370
Fistulifera solaris
7.1e-36
154.1
327
36.1
fso146110
Fistulifera solaris
7.1e-36
154.1
327
36.1
WBGene00014025
Caenorhabditis elegans
9.3e-36
153.7
322
32.3
Cre03.g204800
Chlamydomonas reinhardtii
1.2e-35
153.3
312
34.3
Naga_100107g13
Nannochloropsis gaditana
1.7e-34
149.4
357
30.8
emh641980
Emiliania huxleyi
6.6e-34
147.5
250
37.6
CC00G20890
Cyclotella cryptica
2.4e-31
139.0
288
31.9
tps115380
Thalassiosira pseudonana
2.6e-30
135.6
325
32.0
YDL100C
Saccharomyces cerevisiae strain S288C
5.8e-30
134.4
344
30.2
Sro92_g048090
Seminavis robusta
3.8e-29
131.7
277
34.7
tho344980
Thalassiosira oceanica
2.3e-26
122.5
277
33.6
Ec-10_002230
Ectocarpus siliculosus
3.9e-26
121.7
339
30.1
emh10870
Emiliania huxleyi
5.3e-15
84.7
79
58.2
AA0010G02160
Aureococcus anophagefferens
1.1e-12
77.0
512
23.0
CC00G113940
Cyclotella cryptica
2.3e-10
69.3
62
50.0
WBGene00018577
Caenorhabditis elegans
1.5e-06
56.6
136
27.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing