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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu33630
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu33630
Galdieria sulphuraria
3.9e-299
1028.1
526
100.0
FBgn0037554
Drosophila melanogaster
1.6e-39
165.6
318
34.0
ENSG00000101751
Homo sapiens
4.5e-37
157.5
350
31.1
emh530300
Emiliania huxleyi
1.6e-34
149.1
324
33.0
emh67860
Emiliania huxleyi
1.6e-34
149.1
324
33.0
ccr169420
Chondrus crispus
5.6e-32
140.6
561
25.0
Cre03.g148050
Chlamydomonas reinhardtii
5.6e-32
140.6
421
27.6
CM01G00620
Cyanidioschyzon merolae
3.7e-31
137.9
265
34.0
sya00G252680
Synedra acus
1.8e-30
135.6
341
30.5
fso43860
Fistulifera solaris
7.6e-29
130.2
335
29.0
Pp3c8_17250
Physcomitrella patens
7.9e-26
120.2
498
26.9
pte645160
Paramecium tetraurelia
1.3e-25
119.4
383
28.5
fso64850
Fistulifera solaris
3.9e-25
117.9
335
27.2
AT5G44740
Arabidopsis thaliana
1.5e-24
115.9
306
29.7
pte497140
Paramecium tetraurelia
2.5e-24
115.2
386
27.7
FBgn0037141
Drosophila melanogaster
4.3e-24
114.4
377
24.7
ENSG00000170734
Homo sapiens
7.4e-24
113.6
325
26.5
gsu71910
Galdieria sulphuraria
3.7e-23
111.3
432
24.3
Ec-01_006080
Ectocarpus siliculosus
4.0e-22
107.8
354
25.7
ptri207540
Phaeodactylum tricornutum
5.3e-22
107.5
340
27.6
Naga_100010g99
Nannochloropsis gaditana
1.2e-21
106.3
473
22.6
Pp3c14_23660
Physcomitrella patens
2.6e-21
105.1
341
25.2
WBGene00014066
Caenorhabditis elegans
7.6e-21
103.6
326
27.9
Pp3c22_4740
Physcomitrella patens
2.9e-20
101.7
296
28.0
AT5G44750
Arabidopsis thaliana
3.8e-20
101.3
295
28.5
AA0002G04000
Aureococcus anophagefferens
4.9e-20
100.9
185
34.6
CM13G02840
Cyanidioschyzon merolae
6.5e-20
100.5
354
25.4
pte538790
Paramecium tetraurelia
3.2e-19
98.2
533
22.0
SPBC1347.01c
Schizosaccharomyces pombe
4.2e-19
97.8
282
28.4
emh540590
Emiliania huxleyi
5.5e-19
97.4
344
25.3
pte531460
Paramecium tetraurelia
9.3e-19
96.7
310
26.5
Sro556_g165920
Seminavis robusta
1.2e-18
96.3
266
27.8
SPBC16A3.11
Schizosaccharomyces pombe
1.6e-18
95.9
333
24.0
ccr06940
Chondrus crispus
6.1e-18
94.0
364
25.5
ps00G173860
Pseudo-nitzschia multiseries
6.1e-18
94.0
277
28.5
Ec-17_000370
Ectocarpus siliculosus
1.3e-17
92.8
136
37.5
sya00G252360
Synedra acus
1.8e-17
92.4
414
24.9
tps112730
Thalassiosira pseudonana
1.8e-17
92.4
361
27.1
emh225200
Emiliania huxleyi
3.0e-17
91.7
335
27.5
gsu07230
Galdieria sulphuraria
3.0e-17
91.7
295
24.7
gsu142230
Galdieria sulphuraria
3.0e-17
91.7
291
29.9
FBgn0035150
Drosophila melanogaster
2.5e-16
88.6
278
25.5
emh725060
Emiliania huxleyi
4.3e-16
87.8
343
25.7
Cre07.g338602
Chlamydomonas reinhardtii
5.7e-16
87.4
487
21.6
sya00G66530
Synedra acus
9.7e-16
86.7
309
27.2
AT1G49980
Arabidopsis thaliana
1.6e-15
85.9
287
26.1
Cre02.g079850
Chlamydomonas reinhardtii
1.6e-15
85.9
242
30.2
emh117440
Emiliania huxleyi
1.6e-15
85.9
88
48.9
ENSG00000122008
Homo sapiens
1.6e-15
85.9
342
25.1
sya00G09980
Synedra acus
2.8e-15
85.1
318
27.4
Cre12.g550800
Chlamydomonas reinhardtii
4.1e-14
81.3
295
24.7
Cre12.g524150
Chlamydomonas reinhardtii
6.9e-14
80.5
135
31.9
fso30800
Fistulifera solaris
2.0e-13
79.0
302
24.8
fso119250
Fistulifera solaris
3.4e-13
78.2
387
24.0
Ec-04_000720
Ectocarpus siliculosus
7.7e-13
77.0
296
25.3
ptri32900
Phaeodactylum tricornutum
7.7e-13
77.0
304
26.3
Ec-14_004450
Ectocarpus siliculosus
2.2e-12
75.5
285
24.2
Naga_100015g71
Nannochloropsis gaditana
2.9e-12
75.1
291
25.4
CC00G27440
Cyclotella cryptica
3.8e-12
74.7
252
27.8
fso166840
Fistulifera solaris
6.5e-12
73.9
245
27.8
Sro142_g066040
Seminavis robusta
1.9e-11
72.4
283
27.9
fso02980
Fistulifera solaris
2.5e-11
72.0
245
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
4.2e-11
71.2
82
43.9
AA0010G01150
Aureococcus anophagefferens
5.5e-11
70.9
245
26.9
gene8065
Fragilariopsis cylindrus
5.5e-11
70.9
233
26.2
fso58700
Fistulifera solaris
5.5e-11
70.9
278
26.3
ps00G09480
Pseudo-nitzschia multiseries
5.5e-11
70.9
310
24.5
WBGene00017696
Caenorhabditis elegans
7.2e-11
70.5
519
22.9
PSNMU-V1.4_AUG-EV-PASAV3_0104030
Pseudo-nitzschia multistriata
2.7e-10
68.6
278
24.1
PSNMU-V1.4_AUG-EV-PASAV3_0106360
Pseudo-nitzschia multistriata
2.7e-10
68.6
314
23.9
ps00G76180
Pseudo-nitzschia multiseries
1.0e-09
66.6
234
27.8
SPCC553.07c
Schizosaccharomyces pombe
1.0e-09
66.6
238
24.4
tps207050
Thalassiosira pseudonana
1.0e-09
66.6
249
27.3
Sro492_g153880
Seminavis robusta
1.4e-09
66.2
254
22.8
gene17968
Fragilariopsis cylindrus
2.3e-09
65.5
318
25.2
CC00G156980
Cyclotella cryptica
3.9e-09
64.7
255
27.5
emh482430
Emiliania huxleyi
3.9e-09
64.7
325
26.2
emh197460
Emiliania huxleyi
3.9e-09
64.7
325
26.2
Naga_100321g4
Nannochloropsis gaditana
8.8e-09
63.5
269
26.4
sya00G217370
Synedra acus
2.0e-08
62.4
311
23.5
tps200150
Thalassiosira pseudonana
2.5e-08
62.0
323
23.8
tho441720
Thalassiosira oceanica
4.3e-08
61.2
233
23.6
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
7.4e-08
60.5
518
22.2
Sro88_g046710
Seminavis robusta
7.4e-08
60.5
383
22.2
ptri209620
Phaeodactylum tricornutum
1.7e-07
59.3
517
21.9
fso144890
Fistulifera solaris
2.2e-07
58.9
278
23.7
CC00G31330
Cyclotella cryptica
3.7e-07
58.2
279
25.8
emh627140
Emiliania huxleyi
6.3e-07
57.4
291
21.3
Sro1969_g308490
Seminavis robusta
1.4e-06
56.2
278
24.8
sya00G113220
Synedra acus
3.1e-06
55.1
416
24.0
ps00G14990
Pseudo-nitzschia multiseries
5.3e-06
54.3
205
28.3
ps00G114530
Pseudo-nitzschia multiseries
5.3e-06
54.3
205
28.3
emh81660
Emiliania huxleyi
6.9e-06
53.9
138
28.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (10 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (5 genes)
Synedra acus (6 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing