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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu141650
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu141650
Galdieria sulphuraria
0.0e+00
1469.1
740
100.0
Pp3c11_24680
Physcomitrella patens
9.1e-129
462.6
554
43.3
AT5G39840
Arabidopsis thaliana
9.4e-126
452.6
548
43.2
ENSG00000156502
Homo sapiens
5.9e-104
380.2
593
40.5
ps00G135460
Pseudo-nitzschia multiseries
7.3e-102
373.2
520
41.3
ptri190020
Phaeodactylum tricornutum
9.5e-102
372.9
542
39.9
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
8.0e-101
369.8
565
39.3
Sro345_g122490
Seminavis robusta
1.4e-100
369.0
514
41.2
CC00G47930
Cyclotella cryptica
6.8e-100
366.7
551
38.3
tps94420
Thalassiosira pseudonana
2.6e-99
364.8
506
40.1
Naga_100445g1
Nannochloropsis gaditana
1.7e-98
362.1
560
38.2
gsu110850
Galdieria sulphuraria
4.9e-98
360.5
560
36.4
sya00G151810
Synedra acus
8.3e-98
359.8
498
40.2
AA0012G01140
Aureococcus anophagefferens
1.9e-97
358.6
483
42.4
gene1104
Fragilariopsis cylindrus
2.4e-97
358.2
554
39.7
Ec-11_000550
Ectocarpus siliculosus
4.1e-97
357.5
518
39.4
FBgn0037232
Drosophila melanogaster
9.2e-97
356.3
543
40.9
AT4G14790
Arabidopsis thaliana
1.3e-95
352.4
479
40.1
WBGene00007444
Caenorhabditis elegans
4.7e-93
344.0
648
35.3
gene8944
Fragilariopsis cylindrus
2.3e-87
325.1
329
50.2
tho295100
Thalassiosira oceanica
5.6e-86
320.5
353
45.0
SPAC637.11
Schizosaccharomyces pombe
2.1e-85
318.5
518
35.9
Naga_100019g77
Nannochloropsis gaditana
1.6e-77
292.4
307
47.6
CM16G01410
Cyanidioschyzon merolae
6.4e-74
280.4
658
30.2
YPL029W
Saccharomyces cerevisiae strain S288C
3.5e-72
274.6
485
35.9
Cre06.g270900
Chlamydomonas reinhardtii
2.4e-44
182.2
570
26.1
AA0016G01420
Aureococcus anophagefferens
5.7e-30
134.4
306
35.9
sya00G127370
Synedra acus
1.2e-27
126.7
278
32.7
ps00G40990
Pseudo-nitzschia multiseries
8.8e-23
110.5
243
35.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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