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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu141210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu141210
Galdieria sulphuraria
3.2e-243
842.0
428
100.0
CM14G02570
Cyanidioschyzon merolae
3.4e-35
151.0
364
30.8
WBGene00013676
Caenorhabditis elegans
2.9e-26
121.3
341
27.6
FBgn0034537
Drosophila melanogaster
6.4e-26
120.2
335
28.7
AT2G47210
Arabidopsis thaliana
1.2e-24
115.9
325
31.4
emh738150
Emiliania huxleyi
6.2e-21
103.6
342
27.5
ENSG00000178028
Homo sapiens
8.1e-21
103.2
335
27.8
Pp3c1_35180
Physcomitrella patens
9.0e-20
99.8
382
28.5
Pp3c2_4040
Physcomitrella patens
2.6e-19
98.2
321
29.3
Cre03.g144907
Chlamydomonas reinhardtii
7.6e-19
96.7
222
30.6
SPAC9G1.13c
Schizosaccharomyces pombe
7.6e-19
96.7
394
26.6
sya00G74360
Synedra acus
2.4e-17
91.7
377
23.9
gene2404
Fragilariopsis cylindrus
3.2e-17
91.3
414
23.7
emh438080
Emiliania huxleyi
2.1e-16
88.6
360
24.7
Naga_100154g2
Nannochloropsis gaditana
6.0e-16
87.0
430
24.2
fso66730
Fistulifera solaris
3.3e-14
81.3
418
23.2
fso174960
Fistulifera solaris
9.6e-14
79.7
419
23.4
Ec-04_000140
Ectocarpus siliculosus
1.3e-13
79.3
336
25.0
Sro1514_g278870
Seminavis robusta
6.2e-13
77.0
431
22.5
ptri146910
Phaeodactylum tricornutum
5.8e-11
70.5
390
21.5
YGR002C
Saccharomyces cerevisiae strain S288C
5.8e-11
70.5
228
28.1
tho62000
Thalassiosira oceanica
1.3e-10
69.3
264
29.2
CC00G148070
Cyclotella cryptica
3.2e-09
64.7
180
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0043260
Pseudo-nitzschia multistriata
4.2e-09
64.3
531
20.2
pte516060
Paramecium tetraurelia
4.2e-09
64.3
170
27.1
pte118250
Paramecium tetraurelia
1.0e-07
59.7
149
27.5
pte53190
Paramecium tetraurelia
6.7e-07
57.0
171
24.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing