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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu110850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu110850
Galdieria sulphuraria
0.0e+00
1403.7
701
100.0
Pp3c11_24680
Physcomitrella patens
1.1e-115
419.1
526
40.3
AT5G39840
Arabidopsis thaliana
5.4e-115
416.8
521
40.3
AT4G14790
Arabidopsis thaliana
8.1e-111
402.9
506
40.7
ENSG00000156502
Homo sapiens
5.3e-110
400.2
512
40.6
gsu141650
Galdieria sulphuraria
9.9e-101
369.4
560
36.4
Naga_100019g77
Nannochloropsis gaditana
9.9e-101
369.4
500
39.8
FBgn0037232
Drosophila melanogaster
2.2e-100
368.2
597
35.2
sya00G151810
Synedra acus
6.4e-100
366.7
528
38.4
WBGene00007444
Caenorhabditis elegans
1.9e-99
365.2
555
36.0
CC00G47930
Cyclotella cryptica
3.9e-97
357.5
498
36.7
Sro345_g122490
Seminavis robusta
5.1e-97
357.1
535
37.0
CM16G01410
Cyanidioschyzon merolae
9.6e-96
352.8
675
34.5
ptri190020
Phaeodactylum tricornutum
9.6e-96
352.8
587
36.1
Naga_100445g1
Nannochloropsis gaditana
1.2e-93
345.9
563
35.9
ps00G135460
Pseudo-nitzschia multiseries
5.8e-93
343.6
502
37.3
tps94420
Thalassiosira pseudonana
3.8e-92
340.9
498
36.9
AA0012G01140
Aureococcus anophagefferens
1.9e-91
338.6
485
40.6
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
1.9e-88
328.6
502
35.5
YPL029W
Saccharomyces cerevisiae strain S288C
1.9e-88
328.6
505
39.0
tho295100
Thalassiosira oceanica
6.9e-86
320.1
387
42.1
SPAC637.11
Schizosaccharomyces pombe
1.0e-84
316.2
569
36.2
Ec-11_000550
Ectocarpus siliculosus
1.3e-84
315.8
544
34.0
gene1104
Fragilariopsis cylindrus
5.0e-84
313.9
547
32.7
gene8944
Fragilariopsis cylindrus
2.0e-72
275.4
329
41.6
Cre06.g270900
Chlamydomonas reinhardtii
2.7e-58
228.4
604
28.3
AA0016G01420
Aureococcus anophagefferens
1.3e-31
139.8
283
34.3
sya00G127370
Synedra acus
6.6e-28
127.5
277
33.9
ps00G40990
Pseudo-nitzschia multiseries
4.7e-26
121.3
243
37.0
CC00G82340
Cyclotella cryptica
5.8e-08
61.2
284
22.2
ptri211310
Phaeodactylum tricornutum
7.6e-08
60.8
75
41.3
CC00G154570
Cyclotella cryptica
2.2e-07
59.3
98
35.7
Sro587_g171320
Seminavis robusta
2.2e-07
59.3
87
37.9
ps00G133440
Pseudo-nitzschia multiseries
2.9e-07
58.9
77
39.0
CM01G00580
Cyanidioschyzon merolae
3.8e-07
58.5
75
40.0
PSNMU-V1.4_AUG-EV-PASAV3_0004390
Pseudo-nitzschia multistriata
4.9e-07
58.2
77
39.0
SPCC550.03c
Schizosaccharomyces pombe
4.9e-07
58.2
172
24.4
AT3G46960
Arabidopsis thaliana
6.4e-07
57.8
77
41.6
FBgn0039117
Drosophila melanogaster
6.4e-07
57.8
77
40.3
sya00G04330
Synedra acus
6.4e-07
57.8
75
38.7
fso74700
Fistulifera solaris
1.1e-06
57.0
77
37.7
fso91130
Fistulifera solaris
1.1e-06
57.0
77
37.7
Naga_100127g1
Nannochloropsis gaditana
1.1e-06
57.0
77
40.3
tho78400
Thalassiosira oceanica
1.1e-06
57.0
78
38.5
Sro345_g122480
Seminavis robusta
1.4e-06
56.6
145
26.2
tps65330
Thalassiosira pseudonana
1.4e-06
56.6
77
37.7
emh485630
Emiliania huxleyi
1.9e-06
56.2
114
30.7
SPAC6F12.16c
Schizosaccharomyces pombe
2.4e-06
55.8
146
28.1
Ec-26_002780
Ectocarpus siliculosus
3.2e-06
55.5
229
24.0
gsu66590
Galdieria sulphuraria
3.2e-06
55.5
128
29.7
WBGene00008502
Caenorhabditis elegans
4.2e-06
55.1
78
37.2
Naga_100087g7
Nannochloropsis gaditana
4.2e-06
55.1
147
27.2
gene18325
Fragilariopsis cylindrus
5.4e-06
54.7
75
36.0
gsu82520
Galdieria sulphuraria
7.1e-06
54.3
78
38.5
Naga_100712g1
Nannochloropsis gaditana
7.1e-06
54.3
118
33.9
CM01G00720
Cyanidioschyzon merolae
9.2e-06
53.9
77
37.7
ENSG00000204351
Homo sapiens
9.2e-06
53.9
85
37.6
ENSG00000225737
Homo sapiens
9.2e-06
53.9
85
37.6
ENSG00000223493
Homo sapiens
9.2e-06
53.9
85
37.6
ENSG00000232616
Homo sapiens
9.2e-06
53.9
85
37.6
ENSG00000206353
Homo sapiens
9.2e-06
53.9
85
37.6
ENSG00000228896
Homo sapiens
9.2e-06
53.9
85
37.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing