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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene6541
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene6541
Fragilariopsis cylindrus
7.0e-157
554.7
293
100.0
ps00G39060
Pseudo-nitzschia multiseries
6.4e-110
398.7
298
70.5
ptri97370
Phaeodactylum tricornutum
6.2e-97
355.5
283
64.0
sya00G61890
Synedra acus
3.0e-91
336.7
280
64.3
fso117180
Fistulifera solaris
3.3e-90
333.2
284
63.0
fso50450
Fistulifera solaris
6.9e-88
325.5
288
61.5
sya00G144450
Synedra acus
5.5e-85
315.8
198
76.8
Sro397_g134430
Seminavis robusta
4.0e-80
299.7
220
69.5
Sro397_g134410
Seminavis robusta
4.0e-80
299.7
220
69.5
tps205130
Thalassiosira pseudonana
3.3e-74
280.0
282
54.3
CC00G17000
Cyclotella cryptica
1.6e-73
277.7
293
57.3
tho145400
Thalassiosira oceanica
4.1e-72
273.1
226
64.6
Naga_100023g38
Nannochloropsis gaditana
8.6e-30
132.5
207
36.7
Ec-21_002440
Ectocarpus siliculosus
2.4e-24
114.4
220
33.2
ptri25880
Phaeodactylum tricornutum
8.6e-22
105.9
228
31.6
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
1.6e-20
101.7
176
36.9
tps162180
Thalassiosira pseudonana
3.0e-19
97.4
158
39.2
CC00G109250
Cyclotella cryptica
2.0e-18
94.7
226
31.9
sya00G39620
Synedra acus
5.7e-18
93.2
158
36.7
fso22080
Fistulifera solaris
7.5e-18
92.8
161
34.2
tho249240
Thalassiosira oceanica
7.5e-18
92.8
158
38.0
fso131290
Fistulifera solaris
1.3e-17
92.0
194
30.4
Sro430_g141370
Seminavis robusta
2.2e-17
91.3
158
35.4
Naga_100073g7
Nannochloropsis gaditana
1.8e-16
88.2
84
48.8
ps00G146700
Pseudo-nitzschia multiseries
1.6e-15
85.1
97
44.3
Pp3c17_2850
Physcomitrella patens
2.0e-15
84.7
118
36.4
ENSG00000024048
Homo sapiens
2.7e-15
84.3
121
33.1
WBGene00016326
Caenorhabditis elegans
3.5e-15
84.0
195
30.8
ENSG00000159459
Homo sapiens
3.5e-15
84.0
182
30.2
Pp3c9_4700
Physcomitrella patens
3.5e-15
84.0
172
29.7
Ec-11_002810
Ectocarpus siliculosus
7.8e-15
82.8
105
39.0
Sro1087_g239810
Seminavis robusta
6.6e-14
79.7
158
29.1
Pp3c15_3560
Physcomitrella patens
1.1e-13
79.0
99
37.4
emh641100
Emiliania huxleyi
4.3e-13
77.0
121
35.5
Pp3c10_20380
Physcomitrella patens
4.3e-13
77.0
198
32.3
FBgn0030809
Drosophila melanogaster
7.3e-13
76.3
121
30.6
Cre02.g089237
Chlamydomonas reinhardtii
3.6e-12
73.9
144
34.7
ccr96920
Chondrus crispus
4.7e-12
73.6
206
28.2
ENSG00000144357
Homo sapiens
6.2e-12
73.2
99
34.3
Pp3c3_24510
Physcomitrella patens
1.4e-11
72.0
142
33.8
Pp3c3_37220
Physcomitrella patens
1.8e-11
71.6
142
33.8
SPAC15A10.11
Schizosaccharomyces pombe
2.0e-10
68.2
124
33.9
SPBC19C7.02
Schizosaccharomyces pombe
5.8e-10
66.6
111
33.3
Pp3c8_2940
Physcomitrella patens
9.8e-10
65.9
142
30.3
Pp3c8_2930
Physcomitrella patens
9.8e-10
65.9
142
30.3
WBGene00017373
Caenorhabditis elegans
6.4e-09
63.2
128
28.1
Pp3c2_29090
Physcomitrella patens
6.4e-09
63.2
187
28.3
AT5G02310
Arabidopsis thaliana
2.4e-08
61.2
115
31.3
emh202570
Emiliania huxleyi
3.0e-06
54.3
39
61.5
emh40430
Emiliania huxleyi
3.0e-06
54.3
39
61.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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