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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene4066
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene4066
Fragilariopsis cylindrus
1.1e-136
487.3
234
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0098080
Pseudo-nitzschia multistriata
3.3e-109
396.0
229
82.1
ps00G111690
Pseudo-nitzschia multiseries
6.2e-108
391.7
234
79.5
gene10602
Fragilariopsis cylindrus
1.7e-92
340.5
163
98.8
Sro764_g199100
Seminavis robusta
3.6e-87
322.8
230
63.9
sya00G186110
Synedra acus
5.0e-81
302.4
228
62.3
sya00G234370
Synedra acus
5.0e-81
302.4
228
62.3
sya00G189390
Synedra acus
1.4e-80
300.8
227
62.1
Sro1504_g278070
Seminavis robusta
2.2e-76
287.0
230
57.4
ptri137950
Phaeodactylum tricornutum
5.3e-75
282.3
235
57.0
fso115100
Fistulifera solaris
3.5e-74
279.6
234
54.3
fso24430
Fistulifera solaris
1.0e-73
278.1
234
54.3
tps11020
Thalassiosira pseudonana
2.4e-59
230.3
241
46.9
CC00G49550
Cyclotella cryptica
4.7e-55
216.1
233
44.6
Ec-08_005340
Ectocarpus siliculosus
3.2e-43
176.8
208
38.0
Ec-27_003350
Ectocarpus siliculosus
3.2e-43
176.8
218
39.9
Naga_100009g77
Nannochloropsis gaditana
7.0e-43
175.6
229
38.9
AA0023G00270
Aureococcus anophagefferens
3.0e-41
170.2
214
38.8
Naga_100001g140
Nannochloropsis gaditana
6.2e-39
162.5
213
35.2
Naga_100072g21
Nannochloropsis gaditana
1.1e-38
161.8
229
37.6
Ec-06_000330
Ectocarpus siliculosus
4.3e-32
139.8
227
35.7
Naga_100003g22
Nannochloropsis gaditana
5.6e-32
139.4
180
36.1
fso191610
Fistulifera solaris
2.3e-30
134.0
207
35.3
ptri163410
Phaeodactylum tricornutum
2.3e-30
134.0
234
32.9
Naga_100009g15
Nannochloropsis gaditana
3.1e-30
133.7
206
33.5
Ec-19_001910
Ectocarpus siliculosus
2.0e-29
131.0
236
32.2
fso43180
Fistulifera solaris
2.6e-29
130.6
194
36.6
Ec-17_003760
Ectocarpus siliculosus
3.7e-28
126.7
227
34.8
Naga_100113g14
Nannochloropsis gaditana
2.3e-25
117.5
231
28.1
tho352920
Thalassiosira oceanica
7.3e-24
112.5
209
30.6
tps59190
Thalassiosira pseudonana
2.8e-23
110.5
209
30.6
fso07670
Fistulifera solaris
3.6e-23
110.2
244
29.5
ptri222920
Phaeodactylum tricornutum
6.2e-23
109.4
242
28.1
CC00G54180
Cyclotella cryptica
1.2e-21
105.1
216
27.8
CC00G69820
Cyclotella cryptica
1.2e-21
105.1
216
27.8
CC00G96720
Cyclotella cryptica
1.2e-21
105.1
216
27.8
CC00G190780
Cyclotella cryptica
1.2e-21
105.1
216
27.8
fso52990
Fistulifera solaris
1.5e-21
104.8
244
28.7
PSNMU-V1.4_AUG-EV-PASAV3_0118960
Pseudo-nitzschia multistriata
7.6e-21
102.4
216
27.8
pte183060
Paramecium tetraurelia
7.6e-21
102.4
215
30.2
YMR079W
Saccharomyces cerevisiae strain S288C
7.6e-21
102.4
213
30.5
Ec-21_000100
Ectocarpus siliculosus
1.3e-20
101.7
151
34.4
YKL091C
Saccharomyces cerevisiae strain S288C
1.7e-20
101.3
220
31.4
gene7382
Fragilariopsis cylindrus
3.8e-20
100.1
223
27.8
SPAC3H8.10
Schizosaccharomyces pombe
6.4e-20
99.4
211
29.4
Sro7_g005990
Seminavis robusta
1.1e-19
98.6
187
26.7
pte379200
Paramecium tetraurelia
4.2e-19
96.7
227
29.5
pte357550
Paramecium tetraurelia
7.1e-19
95.9
215
28.8
ps00G143260
Pseudo-nitzschia multiseries
1.2e-18
95.1
182
30.2
Sro7_g006340
Seminavis robusta
1.2e-18
95.1
212
29.2
Sro229_g093110
Seminavis robusta
1.2e-18
95.1
244
27.9
Cre17.g703200
Chlamydomonas reinhardtii
2.7e-18
94.0
219
29.2
Sro2588_g331970
Seminavis robusta
6.0e-18
92.8
248
29.0
AT4G39170
Arabidopsis thaliana
7.8e-18
92.4
216
29.6
sya00G123210
Synedra acus
1.0e-17
92.0
193
26.4
AT4G34580
Arabidopsis thaliana
3.0e-17
90.5
216
28.2
Naga_100023g42
Nannochloropsis gaditana
3.9e-17
90.1
201
30.8
Sro906_g218700
Seminavis robusta
3.9e-17
90.1
248
28.6
AT2G21520
Arabidopsis thaliana
1.5e-16
88.2
216
27.3
AT2G21540
Arabidopsis thaliana
1.5e-16
88.2
214
28.0
Naga_100058g27
Nannochloropsis gaditana
5.6e-16
86.3
133
35.3
Ec-24_002870
Ectocarpus siliculosus
7.3e-16
85.9
222
27.5
AT3G24840
Arabidopsis thaliana
1.6e-15
84.7
212
27.4
Cre12.g527050
Chlamydomonas reinhardtii
3.6e-15
83.6
212
26.4
Pp3c3_20900
Physcomitrella patens
3.6e-15
83.6
215
27.4
WBGene00011962
Caenorhabditis elegans
1.1e-14
82.0
214
29.4
AT1G19650
Arabidopsis thaliana
6.9e-14
79.3
216
26.9
AT2G16380
Arabidopsis thaliana
6.9e-14
79.3
214
25.2
AT1G55690
Arabidopsis thaliana
1.2e-13
78.6
224
29.0
AT1G75370
Arabidopsis thaliana
3.4e-13
77.0
214
26.2
Pp3c6_15520
Physcomitrella patens
5.8e-13
76.3
216
26.4
Sro1272_g258250
Seminavis robusta
2.2e-12
74.3
185
24.3
Cre02.g141950
Chlamydomonas reinhardtii
4.9e-12
73.2
216
25.5
CC00G115600
Cyclotella cryptica
6.4e-12
72.8
194
22.2
CC00G120950
Cyclotella cryptica
6.4e-12
72.8
194
22.2
Pp3c5_15450
Physcomitrella patens
6.4e-12
72.8
216
26.9
ENSG00000103184
Homo sapiens
1.1e-11
72.0
214
26.6
ENSG00000129657
Homo sapiens
1.1e-11
72.0
189
27.5
tho26760
Thalassiosira oceanica
1.4e-11
71.6
170
24.7
ptri128010
Phaeodactylum tricornutum
4.2e-11
70.1
166
28.3
Sro234_g094540
Seminavis robusta
4.2e-11
70.1
209
25.8
emh763770
Emiliania huxleyi
5.4e-11
69.7
230
24.8
Cre02.g147800
Chlamydomonas reinhardtii
7.1e-11
69.3
214
23.4
Sro273_g105100
Seminavis robusta
7.1e-11
69.3
166
25.9
AT5G56160
Arabidopsis thaliana
9.3e-11
68.9
215
26.0
fso196290
Fistulifera solaris
2.1e-10
67.8
174
25.9
Pp3c15_22280
Physcomitrella patens
2.1e-10
67.8
225
24.9
emh76920
Emiliania huxleyi
2.7e-10
67.4
220
23.2
fso42020
Fistulifera solaris
2.7e-10
67.4
174
25.9
ps00G26530
Pseudo-nitzschia multiseries
7.8e-10
65.9
197
23.4
Cre16.g683400
Chlamydomonas reinhardtii
1.0e-09
65.5
178
26.4
Sro265_g102760
Seminavis robusta
1.7e-09
64.7
205
24.4
sya00G93900
Synedra acus
1.7e-09
64.7
214
22.9
emh483630
Emiliania huxleyi
2.3e-09
64.3
240
22.9
Pp3c17_490
Physcomitrella patens
2.3e-09
64.3
218
24.3
tps115840
Thalassiosira pseudonana
2.3e-09
64.3
170
22.4
gsu49100
Galdieria sulphuraria
3.9e-09
63.5
225
22.7
AA0001G01590
Aureococcus anophagefferens
6.6e-09
62.8
212
26.9
Ec-21_004980
Ectocarpus siliculosus
8.7e-09
62.4
106
31.1
tps82150
Thalassiosira pseudonana
3.3e-08
60.5
209
25.4
Pp3c9_2900
Physcomitrella patens
4.3e-08
60.1
98
35.7
CC00G210030
Cyclotella cryptica
5.6e-08
59.7
105
27.6
AT1G55840
Arabidopsis thaliana
7.3e-08
59.3
196
22.4
Pp3c7_7820
Physcomitrella patens
9.6e-08
58.9
94
36.2
PSNMU-V1.4_AUG-EV-PASAV3_0012980
Pseudo-nitzschia multistriata
1.3e-07
58.5
228
24.6
Pp3c11_20220
Physcomitrella patens
1.6e-07
58.2
205
26.8
AT5G47730
Arabidopsis thaliana
2.1e-07
57.8
190
23.7
CC00G93480
Cyclotella cryptica
2.1e-07
57.8
226
23.0
Sro2540_g330650
Seminavis robusta
2.1e-07
57.8
222
24.3
gene7242
Fragilariopsis cylindrus
2.8e-07
57.4
205
24.9
ptri242570
Phaeodactylum tricornutum
2.8e-07
57.4
228
24.6
Sro2071_g313400
Seminavis robusta
2.8e-07
57.4
222
24.3
AT1G22180
Arabidopsis thaliana
4.8e-07
56.6
219
22.4
tho459880
Thalassiosira oceanica
6.2e-07
56.2
206
22.8
Ec-24_002880
Ectocarpus siliculosus
8.1e-07
55.8
79
36.7
gsu28510
Galdieria sulphuraria
8.1e-07
55.8
188
30.3
ENSG00000133488
Homo sapiens
8.1e-07
55.8
232
23.3
Pp3c14_20050
Physcomitrella patens
1.1e-06
55.5
67
43.3
AT4G08690
Arabidopsis thaliana
1.8e-06
54.7
220
21.8
emh773480
Emiliania huxleyi
1.8e-06
54.7
153
24.8
gene11290
Fragilariopsis cylindrus
2.4e-06
54.3
176
24.4
AT1G30690
Arabidopsis thaliana
4.0e-06
53.5
209
26.8
WBGene00007925
Caenorhabditis elegans
5.3e-06
53.1
103
29.1
ps00G25080
Pseudo-nitzschia multiseries
5.3e-06
53.1
168
25.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (9 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (9 genes)
Nannochloropsis gaditana (8 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (13 genes)
Synedra acus (5 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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