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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene16313
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene16313
Fragilariopsis cylindrus
6.8e-181
634.4
287
100.0
ps00G33510
Pseudo-nitzschia multiseries
2.2e-155
549.7
270
89.6
ptri130290
Phaeodactylum tricornutum
5.6e-143
508.4
287
79.4
Sro968_g226070
Seminavis robusta
2.1e-142
506.5
288
78.8
fso77080
Fistulifera solaris
1.4e-138
493.8
289
76.1
Sro99_g050950
Seminavis robusta
3.2e-138
492.7
275
79.3
sya00G161050
Synedra acus
4.6e-137
488.8
277
77.3
fso160310
Fistulifera solaris
6.2e-134
478.4
289
74.4
fso77050
Fistulifera solaris
2.6e-132
473.0
287
74.9
fso191720
Fistulifera solaris
7.6e-132
471.5
286
74.5
tps130000
Thalassiosira pseudonana
2.9e-107
389.8
241
70.1
tho217020
Thalassiosira oceanica
2.4e-93
343.6
242
59.9
tps142420
Thalassiosira pseudonana
2.7e-81
303.5
240
52.5
tps193950
Thalassiosira pseudonana
1.0e-80
301.6
240
52.9
ptri72160
Phaeodactylum tricornutum
1.8e-80
300.8
278
47.8
sya00G196410
Synedra acus
2.3e-80
300.4
280
47.9
ptri69840
Phaeodactylum tricornutum
2.0e-79
297.4
299
44.1
Sro70_g039030
Seminavis robusta
3.4e-79
296.6
283
46.3
fso199510
Fistulifera solaris
8.3e-78
292.0
284
44.0
ps00G65070
Pseudo-nitzschia multiseries
1.4e-77
291.2
288
45.1
CC00G149660
Cyclotella cryptica
1.0e-75
285.0
328
40.5
fso73640
Fistulifera solaris
1.0e-75
285.0
284
43.3
gene18213
Fragilariopsis cylindrus
3.8e-75
283.1
300
42.3
fso43770
Fistulifera solaris
5.0e-75
282.7
282
44.7
fso64760
Fistulifera solaris
5.0e-75
282.7
282
44.7
Sro695_g188680
Seminavis robusta
1.4e-69
264.6
255
45.9
CC00G122160
Cyclotella cryptica
5.4e-69
262.7
221
50.2
CC00G69060
Cyclotella cryptica
2.9e-62
240.4
148
68.2
sya00G00440
Synedra acus
1.3e-54
214.9
180
50.0
ENSG00000163743
Homo sapiens
1.0e-51
205.3
226
38.9
FBgn0031816
Drosophila melanogaster
5.6e-50
199.5
249
38.2
ccr65580
Chondrus crispus
5.1e-43
176.4
245
36.7
Sro9_g007140
Seminavis robusta
1.6e-41
171.4
141
50.4
CM13G01410
Cyanidioschyzon merolae
2.1e-41
171.0
245
37.1
Cre05.g248550
Chlamydomonas reinhardtii
6.8e-40
166.0
242
34.7
SPAC2F3.16
Schizosaccharomyces pombe
8.9e-40
165.6
254
32.7
Cre17.g718300
Chlamydomonas reinhardtii
1.5e-39
164.9
245
33.9
Naga_100090g9
Nannochloropsis gaditana
3.4e-39
163.7
283
32.9
AT1G74770
Arabidopsis thaliana
1.3e-38
161.8
242
34.7
sya00G162130
Synedra acus
1.3e-38
161.8
252
35.7
AT3G18290
Arabidopsis thaliana
1.7e-38
161.4
264
34.5
CC00G86210
Cyclotella cryptica
1.1e-37
158.7
250
33.2
Pp3c10_4820
Physcomitrella patens
4.1e-37
156.8
266
31.6
AT3G62970
Arabidopsis thaliana
1.2e-36
155.2
243
33.3
fso155640
Fistulifera solaris
1.2e-36
155.2
251
33.5
tho328140
Thalassiosira oceanica
1.6e-36
154.8
271
33.9
ccr36960
Chondrus crispus
2.1e-36
154.5
261
33.3
Pp3c14_5600
Physcomitrella patens
3.5e-36
153.7
244
32.0
AT1G18910
Arabidopsis thaliana
1.9e-34
147.9
240
31.7
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
4.3e-34
146.7
79
77.2
tps146910
Thalassiosira pseudonana
1.6e-33
144.8
221
34.4
ccr161060
Chondrus crispus
2.1e-33
144.4
248
32.7
AT5G18650
Arabidopsis thaliana
2.8e-33
144.1
244
29.9
AT5G22920
Arabidopsis thaliana
2.8e-33
144.1
245
30.2
Pp3c11_6970
Physcomitrella patens
3.6e-33
143.7
245
32.2
Ec-26_004520
Ectocarpus siliculosus
6.2e-33
142.9
265
29.8
ps00G05920
Pseudo-nitzschia multiseries
2.4e-32
141.0
250
31.6
Pp3c1_6070
Physcomitrella patens
5.8e-31
136.3
245
31.4
gsu76240
Galdieria sulphuraria
9.9e-31
135.6
249
30.9
Pp3c2_31820
Physcomitrella patens
9.9e-31
135.6
245
31.4
Pp3c6_1960
Physcomitrella patens
6.4e-30
132.9
241
29.9
fso150310
Fistulifera solaris
1.2e-28
128.6
189
33.9
Pp3c25_14501
Physcomitrella patens
1.6e-28
128.3
241
29.9
Pp3c25_14500
Physcomitrella patens
1.6e-28
128.3
241
29.9
AT5G25560
Arabidopsis thaliana
6.0e-28
126.3
210
31.9
pte243060
Paramecium tetraurelia
3.0e-27
124.0
247
29.6
pte443830
Paramecium tetraurelia
4.0e-24
113.6
246
27.6
tho87860
Thalassiosira oceanica
4.0e-24
113.6
210
29.0
pte760660
Paramecium tetraurelia
3.8e-22
107.1
247
27.1
gene11141
Fragilariopsis cylindrus
7.1e-21
102.8
196
28.6
Sro9_g007130
Seminavis robusta
5.3e-08
60.1
39
59.0
SPBC17D11.02c
Schizosaccharomyces pombe
6.5e-06
53.1
68
33.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing