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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene14810
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene14810
Fragilariopsis cylindrus
1.1e-215
750.4
368
100.0
ps00G171940
Pseudo-nitzschia multiseries
1.6e-195
683.3
368
90.2
PSNMU-V1.4_AUG-EV-PASAV3_0001730
Pseudo-nitzschia multistriata
9.0e-194
677.6
368
89.9
Sro635_g179140
Seminavis robusta
1.2e-153
544.3
380
69.7
ptri64220
Phaeodactylum tricornutum
2.0e-145
516.9
378
67.2
sya00G106840
Synedra acus
5.3e-138
492.3
377
64.7
fso16160
Fistulifera solaris
2.0e-137
490.3
379
63.9
fso117840
Fistulifera solaris
1.3e-136
487.6
379
64.1
CC00G148520
Cyclotella cryptica
9.2e-114
411.8
389
53.5
tps168090
Thalassiosira pseudonana
1.6e-113
411.0
365
56.2
tho42080
Thalassiosira oceanica
3.7e-107
389.8
377
52.5
ENSG00000100150
Homo sapiens
9.3e-58
225.7
365
37.8
FBgn0035227
Drosophila melanogaster
9.6e-55
215.7
383
31.9
Naga_100262g3
Nannochloropsis gaditana
1.2e-52
208.8
526
29.5
Ec-06_001040
Ectocarpus siliculosus
1.6e-49
198.4
401
32.4
WBGene00011604
Caenorhabditis elegans
1.4e-40
168.7
335
31.6
gsu101930
Galdieria sulphuraria
1.4e-37
158.7
379
27.7
gsu101950
Galdieria sulphuraria
1.4e-37
158.7
379
27.7
emh311680
Emiliania huxleyi
2.0e-36
154.8
359
29.0
SPBC26H8.04c
Schizosaccharomyces pombe
6.5e-35
149.8
360
28.3
YJR138W
Saccharomyces cerevisiae strain S288C
6.7e-32
139.8
296
27.7
pte473990
Paramecium tetraurelia
2.0e-15
85.1
373
23.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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