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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene11457
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene11457
Fragilariopsis cylindrus
0.0e+00
2243.0
1249
100.0
ps00G96190
Pseudo-nitzschia multiseries
0.0e+00
1386.7
1269
61.8
ptri38480
Phaeodactylum tricornutum
7.8e-264
912.1
1281
45.0
Sro1898_g304140
Seminavis robusta
5.4e-257
889.4
982
51.2
fso90910
Fistulifera solaris
7.6e-251
869.0
871
54.8
sya00G228820
Synedra acus
4.8e-245
849.7
887
51.3
fso146770
Fistulifera solaris
1.5e-243
844.7
851
54.1
CC00G206730
Cyclotella cryptica
3.7e-173
610.9
878
42.5
tho323140
Thalassiosira oceanica
1.5e-76
290.0
383
46.2
Naga_100196g2
Nannochloropsis gaditana
1.6e-54
216.9
382
36.9
Ec-00_010010
Ectocarpus siliculosus
1.6e-46
190.3
435
32.2
AT2G45620
Arabidopsis thaliana
7.9e-30
134.8
364
29.1
gsu103070
Galdieria sulphuraria
1.7e-24
117.1
348
29.9
ccr195800
Chondrus crispus
2.2e-24
116.7
376
27.1
Pp3c2_23720
Physcomitrella patens
8.7e-21
104.8
374
25.4
ENSG00000134744
Homo sapiens
1.9e-20
103.6
340
26.8
SPAC19D5.03
Schizosaccharomyces pombe
1.9e-20
103.6
359
25.9
ENSG00000083223
Homo sapiens
4.3e-20
102.4
342
25.7
ENSG00000164329
Homo sapiens
6.9e-18
95.1
372
26.1
WBGene00019628
Caenorhabditis elegans
3.4e-17
92.8
334
26.3
CM20G05810
Cyanidioschyzon merolae
3.8e-16
89.4
287
25.1
tho450500
Thalassiosira oceanica
8.4e-16
88.2
520
26.0
FBgn0038934
Drosophila melanogaster
1.2e-14
84.3
339
23.6
tho509200
Thalassiosira oceanica
1.2e-14
84.3
100
47.0
SPBC1685.06
Schizosaccharomyces pombe
1.6e-14
84.0
449
22.7
emh647220
Emiliania huxleyi
2.3e-13
80.1
264
26.1
WBGene00001596
Caenorhabditis elegans
5.1e-13
79.0
204
24.5
FBgn0260780
Drosophila melanogaster
6.7e-13
78.6
362
22.9
Ec-22_000020
Ectocarpus siliculosus
1.5e-12
77.4
298
26.2
WBGene00019629
Caenorhabditis elegans
3.3e-12
76.3
352
23.6
gsu128260
Galdieria sulphuraria
7.4e-12
75.1
193
25.4
SPAC821.04c
Schizosaccharomyces pombe
1.6e-11
73.9
384
22.7
Pp3c9_24560
Physcomitrella patens
6.3e-11
72.0
211
25.1
Pp3c9_24568
Physcomitrella patens
6.3e-11
72.0
211
25.1
Cre10.g455700
Chlamydomonas reinhardtii
1.1e-10
71.2
274
25.2
SPAC17H9.01
Schizosaccharomyces pombe
1.1e-10
71.2
299
24.4
ps00G106310
Pseudo-nitzschia multiseries
6.9e-10
68.6
323
24.1
sya00G19380
Synedra acus
1.0e-08
64.7
326
21.8
emh129830
Emiliania huxleyi
1.3e-08
64.3
150
30.7
fso97490
Fistulifera solaris
5.0e-08
62.4
196
27.0
CC00G69280
Cyclotella cryptica
6.5e-08
62.0
173
28.9
AT3G45750
Arabidopsis thaliana
8.5e-08
61.6
155
26.5
gene14200
Fragilariopsis cylindrus
1.4e-07
60.8
104
35.6
fso28560
Fistulifera solaris
4.2e-07
59.3
191
25.7
WBGene00009284
Caenorhabditis elegans
5.5e-07
58.9
187
25.7
pte744760
Paramecium tetraurelia
5.5e-07
58.9
157
27.4
pte139970
Paramecium tetraurelia
9.3e-07
58.2
187
28.9
gene11138
Fragilariopsis cylindrus
1.2e-06
57.8
180
25.0
Naga_100796g1
Nannochloropsis gaditana
1.2e-06
57.8
300
24.3
PSNMU-V1.4_AUG-EV-PASAV3_0077850
Pseudo-nitzschia multistriata
1.2e-06
57.8
247
24.7
Pp3c23_15730
Physcomitrella patens
1.6e-06
57.4
201
24.9
ps00G165110
Pseudo-nitzschia multiseries
1.6e-06
57.4
91
33.0
Cre06.g280420
Chlamydomonas reinhardtii
3.6e-06
56.2
175
29.1
ptri68660
Phaeodactylum tricornutum
3.6e-06
56.2
91
36.3
ptri11600
Phaeodactylum tricornutum
4.6e-06
55.8
194
27.8
fso199730
Fistulifera solaris
6.1e-06
55.5
146
28.1
pte744740
Paramecium tetraurelia
6.1e-06
55.5
151
28.5
emh537300
Emiliania huxleyi
7.9e-06
55.1
164
27.4
emh125510
Emiliania huxleyi
7.9e-06
55.1
164
27.4
emh100670
Emiliania huxleyi
7.9e-06
55.1
164
27.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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