Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene10181
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene10181
Fragilariopsis cylindrus
5.6e-101
368.6
230
100.0
gene20940
Fragilariopsis cylindrus
1.7e-97
357.1
232
97.8
PSNMU-V1.4_AUG-EV-PASAV3_0054510
Pseudo-nitzschia multistriata
7.1e-56
218.8
228
52.6
ptri09700
Phaeodactylum tricornutum
4.1e-19
96.7
120
47.5
fso174540
Fistulifera solaris
4.2e-16
86.7
155
37.4
sya00G05790
Synedra acus
5.5e-16
86.3
171
35.1
fso140540
Fistulifera solaris
7.2e-16
85.9
125
40.8
CC00G57010
Cyclotella cryptica
3.7e-12
73.6
129
33.3
tho196600
Thalassiosira oceanica
5.3e-11
69.7
160
29.4
tps71590
Thalassiosira pseudonana
1.2e-10
68.6
129
31.8
sya00G161710
Synedra acus
2.5e-08
60.8
163
28.8
ptri32460
Phaeodactylum tricornutum
7.2e-08
59.3
178
24.7
fso151960
Fistulifera solaris
1.6e-07
58.2
75
32.0
Sro107_g054050
Seminavis robusta
2.1e-07
57.8
182
22.5
ps00G78480
Pseudo-nitzschia multiseries
2.7e-07
57.4
141
27.0
gene3187
Fragilariopsis cylindrus
3.6e-07
57.0
124
29.8
tho194020
Thalassiosira oceanica
3.6e-07
57.0
127
31.5
tps38520
Thalassiosira pseudonana
4.7e-07
56.6
127
31.5
CC00G196020
Cyclotella cryptica
6.1e-07
56.2
127
32.3
fso33230
Fistulifera solaris
8.0e-07
55.8
129
27.1
sya00G53380
Synedra acus
1.0e-06
55.5
168
28.0
sya00G205170
Synedra acus
1.8e-06
54.7
109
27.5
fso54280
Fistulifera solaris
3.0e-06
53.9
127
28.3
ptri223580
Phaeodactylum tricornutum
3.0e-06
53.9
134
29.1
fso168420
Fistulifera solaris
4.0e-06
53.5
75
29.3
tps32140
Thalassiosira pseudonana
4.0e-06
53.5
126
29.4
CC00G82150
Cyclotella cryptica
5.2e-06
53.1
71
32.4
tho592300
Thalassiosira oceanica
5.2e-06
53.1
127
28.3
tps217010
Thalassiosira pseudonana
5.2e-06
53.1
91
36.3
fso123550
Fistulifera solaris
6.8e-06
52.8
127
27.6
sya00G43360
Synedra acus
6.8e-06
52.8
127
27.6
ptri229170
Phaeodactylum tricornutum
8.8e-06
52.4
128
25.0
Sro176_g077270
Seminavis robusta
8.8e-06
52.4
162
28.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (5 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing