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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso94960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso94960
Fistulifera solaris
1.3e-230
800.0
393
100.0
Sro98_g050430
Seminavis robusta
2.3e-102
374.0
340
53.5
sya00G78940
Synedra acus
2.1e-95
350.9
373
49.3
ptri107000
Phaeodactylum tricornutum
1.3e-94
348.2
324
55.2
CC00G31780
Cyclotella cryptica
3.3e-93
343.6
400
46.8
tho40400
Thalassiosira oceanica
8.9e-83
308.9
379
44.3
tps30870
Thalassiosira pseudonana
8.4e-81
302.4
343
47.8
PSNMU-V1.4_AUG-EV-PASAV3_0030280
Pseudo-nitzschia multistriata
4.8e-68
260.0
459
39.7
ps00G29310
Pseudo-nitzschia multiseries
4.6e-63
243.4
385
40.8
gene14795
Fragilariopsis cylindrus
2.8e-60
234.2
412
37.6
Naga_100210g2
Nannochloropsis gaditana
2.0e-58
228.0
451
34.8
Ec-04_002960
Ectocarpus siliculosus
4.5e-58
226.9
393
39.9
FBgn0037108
Drosophila melanogaster
1.8e-54
214.9
374
38.8
ENSG00000253710
Homo sapiens
1.6e-52
208.4
381
35.2
AT2G40190
Arabidopsis thaliana
2.0e-50
201.4
348
37.4
gsu48660
Galdieria sulphuraria
7.6e-50
199.5
371
34.0
Pp3c14_26870
Physcomitrella patens
2.2e-49
198.0
349
37.8
WBGene00015162
Caenorhabditis elegans
3.0e-46
187.6
386
32.6
pte172290
Paramecium tetraurelia
3.0e-46
187.6
384
31.5
Cre01.g058521
Chlamydomonas reinhardtii
1.3e-44
182.2
353
36.5
AA0005G01180
Aureococcus anophagefferens
1.5e-42
175.3
358
35.8
SPCC330.08
Schizosaccharomyces pombe
4.5e-42
173.7
341
34.9
ccr30260
Chondrus crispus
1.4e-40
168.7
387
32.6
YNL048W
Saccharomyces cerevisiae strain S288C
6.7e-38
159.8
350
31.4
CM09G03010
Cyanidioschyzon merolae
3.6e-23
110.9
400
27.0
emh321650
Emiliania huxleyi
2.3e-14
81.6
218
30.7
emh355880
Emiliania huxleyi
7.5e-13
76.6
212
30.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing