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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso85050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso85050
Fistulifera solaris
6.5e-67
254.6
128
100.0
fso95610
Fistulifera solaris
1.9e-26
120.2
128
46.9
tho86000
Thalassiosira oceanica
4.7e-25
115.5
126
49.2
tho89820
Thalassiosira oceanica
1.1e-24
114.4
126
48.4
tho158140
Thalassiosira oceanica
1.4e-24
114.0
126
48.4
CC00G15910
Cyclotella cryptica
1.8e-24
113.6
126
43.7
sya00G170370
Synedra acus
8.9e-24
111.3
107
53.3
CC00G45280
Cyclotella cryptica
2.0e-23
110.2
126
42.9
fso181140
Fistulifera solaris
2.0e-23
110.2
128
46.1
tho219020
Thalassiosira oceanica
2.0e-23
110.2
126
46.0
CC00G25420
Cyclotella cryptica
2.6e-23
109.8
126
42.1
fso63650
Fistulifera solaris
4.4e-23
109.0
128
42.2
ptri24690
Phaeodactylum tricornutum
7.5e-23
108.2
127
44.1
ptri237730
Phaeodactylum tricornutum
7.5e-23
108.2
127
44.1
CC00G63170
Cyclotella cryptica
2.2e-22
106.7
126
42.1
CC00G89570
Cyclotella cryptica
2.9e-22
106.3
126
40.5
CC00G160950
Cyclotella cryptica
2.9e-22
106.3
125
42.4
CC00G87410
Cyclotella cryptica
3.2e-21
102.8
117
42.7
sya00G45490
Synedra acus
1.7e-19
97.1
131
42.0
sya00G236680
Synedra acus
1.7e-19
97.1
131
42.0
sya00G247220
Synedra acus
1.7e-19
97.1
131
42.0
CC00G83480
Cyclotella cryptica
2.3e-19
96.7
132
44.7
sya00G153830
Synedra acus
2.3e-19
96.7
128
39.8
tho254620
Thalassiosira oceanica
4.3e-18
92.4
115
40.9
tho104200
Thalassiosira oceanica
5.6e-18
92.0
131
45.8
tho56660
Thalassiosira oceanica
7.3e-18
91.7
135
42.2
tho99520
Thalassiosira oceanica
7.3e-18
91.7
130
45.4
CC00G35370
Cyclotella cryptica
1.1e-16
87.8
132
42.4
tho94380
Thalassiosira oceanica
1.8e-16
87.0
128
38.3
tho615200
Thalassiosira oceanica
1.8e-16
87.0
133
41.4
tho293920
Thalassiosira oceanica
2.4e-16
86.7
135
40.7
fso06610
Fistulifera solaris
3.1e-16
86.3
130
42.3
sya00G35570
Synedra acus
4.0e-16
85.9
128
39.8
fso200830
Fistulifera solaris
8.9e-16
84.7
130
42.3
sya00G49730
Synedra acus
2.0e-15
83.6
131
40.5
tho78180
Thalassiosira oceanica
2.6e-15
83.2
128
37.5
fso11860
Fistulifera solaris
7.6e-15
81.6
128
41.4
tho338540
Thalassiosira oceanica
7.6e-15
81.6
135
38.5
tho308940
Thalassiosira oceanica
2.2e-14
80.1
124
38.7
Sro1780_g078321
Seminavis robusta
4.9e-14
79.0
130
37.7
tho197380
Thalassiosira oceanica
4.1e-13
75.9
130
42.3
tho94400
Thalassiosira oceanica
7.1e-13
75.1
131
37.4
tho658720
Thalassiosira oceanica
1.2e-12
74.3
111
38.7
sya00G185170
Synedra acus
1.6e-12
73.9
87
39.1
tho64380
Thalassiosira oceanica
2.1e-12
73.6
128
43.0
tho20420
Thalassiosira oceanica
2.7e-12
73.2
130
37.7
sya00G226260
Synedra acus
7.8e-12
71.6
119
41.2
tho16720
Thalassiosira oceanica
1.0e-11
71.2
130
36.2
sya00G267240
Synedra acus
1.3e-11
70.9
78
51.3
fso38500
Fistulifera solaris
3.9e-11
69.3
125
36.8
tho594880
Thalassiosira oceanica
5.1e-11
68.9
128
39.8
Sro1263_g257161
Seminavis robusta
8.7e-11
68.2
108
37.0
Sro4073_g136782
Seminavis robusta
8.7e-11
68.2
108
37.0
Sro1185_g250241
Seminavis robusta
1.9e-10
67.0
108
36.1
ptri12390
Phaeodactylum tricornutum
1.2e-09
64.3
134
37.3
tho111660
Thalassiosira oceanica
1.6e-09
63.9
75
45.3
CC00G30360
Cyclotella cryptica
2.8e-09
63.2
90
43.3
ptri98580
Phaeodactylum tricornutum
2.8e-09
63.2
135
37.0
ptri104120
Phaeodactylum tricornutum
4.7e-09
62.4
139
36.7
sya00G45520
Synedra acus
1.1e-08
61.2
90
40.0
Naga_100235g1
Nannochloropsis gaditana
3.1e-08
59.7
125
30.4
Pp3c23_8160
Physcomitrella patens
3.1e-08
59.7
121
33.9
CC00G166190
Cyclotella cryptica
4.0e-08
59.3
70
35.7
tho478020
Thalassiosira oceanica
4.0e-08
59.3
121
38.0
ccr186220
Chondrus crispus
6.9e-08
58.5
119
30.3
Naga_101142g1
Nannochloropsis gaditana
1.2e-07
57.8
126
29.4
Naga_100294g4
Nannochloropsis gaditana
1.5e-07
57.4
126
29.4
sya00G94760
Synedra acus
1.5e-07
57.4
78
37.2
tho658260
Thalassiosira oceanica
1.5e-07
57.4
85
44.7
fso121990
Fistulifera solaris
2.0e-07
57.0
103
37.9
tho315660
Thalassiosira oceanica
2.0e-07
57.0
84
44.0
tho562440
Thalassiosira oceanica
5.8e-07
55.5
85
43.5
ptri98640
Phaeodactylum tricornutum
7.6e-07
55.1
129
36.4
fso120110
Fistulifera solaris
9.9e-07
54.7
121
33.9
Naga_100999g3
Nannochloropsis gaditana
9.9e-07
54.7
126
30.2
Naga_101002g3
Nannochloropsis gaditana
9.9e-07
54.7
126
29.4
Naga_100252g2
Nannochloropsis gaditana
9.9e-07
54.7
125
28.8
Naga_102250g1
Nannochloropsis gaditana
1.3e-06
54.3
126
28.6
Naga_100549g4
Nannochloropsis gaditana
1.7e-06
53.9
124
28.2
CC00G123980
Cyclotella cryptica
2.2e-06
53.5
86
41.9
fso79470
Fistulifera solaris
2.2e-06
53.5
125
31.2
fso200820
Fistulifera solaris
2.2e-06
53.5
125
31.2
tho319340
Thalassiosira oceanica
2.9e-06
53.1
75
45.3
ptri51190
Phaeodactylum tricornutum
3.8e-06
52.8
82
35.4
Naga_101146g2
Nannochloropsis gaditana
4.9e-06
52.4
82
35.4
Pp3c2_13210
Physcomitrella patens
4.9e-06
52.4
123
29.3
ccr187100
Chondrus crispus
6.4e-06
52.0
112
31.2
ccr30000
Chondrus crispus
8.4e-06
51.6
120
30.8
Ec-03_001760
Ectocarpus siliculosus
8.4e-06
51.6
127
28.3
tho318120
Thalassiosira oceanica
8.4e-06
51.6
88
35.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (7 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (28 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (12 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (12 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (9 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (12 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing