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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso77080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso77080
Fistulifera solaris
4.3e-204
711.8
367
100.0
fso160310
Fistulifera solaris
1.1e-186
654.1
367
92.1
fso77050
Fistulifera solaris
1.9e-156
553.5
323
78.0
fso191720
Fistulifera solaris
3.3e-156
552.7
323
78.0
ptri130290
Phaeodactylum tricornutum
2.1e-150
533.5
315
75.6
Sro968_g226070
Seminavis robusta
1.8e-146
520.4
292
77.4
sya00G161050
Synedra acus
3.3e-140
499.6
299
74.6
gene16313
Fragilariopsis cylindrus
2.6e-137
490.0
289
76.1
Sro99_g050950
Seminavis robusta
4.2e-135
482.6
272
76.1
ps00G33510
Pseudo-nitzschia multiseries
7.2e-135
481.9
270
79.3
tps130000
Thalassiosira pseudonana
5.2e-109
396.0
246
69.5
tho217020
Thalassiosira oceanica
5.8e-100
365.9
325
50.5
tps142420
Thalassiosira pseudonana
1.9e-82
307.8
240
54.2
tps193950
Thalassiosira pseudonana
2.1e-81
304.3
240
54.6
fso199510
Fistulifera solaris
4.6e-81
303.1
288
46.9
ptri72160
Phaeodactylum tricornutum
1.7e-80
301.2
365
41.6
ptri69840
Phaeodactylum tricornutum
2.5e-79
297.4
337
41.8
Sro70_g039030
Seminavis robusta
2.5e-79
297.4
386
38.1
fso73640
Fistulifera solaris
3.3e-79
297.0
317
43.5
sya00G196410
Synedra acus
7.3e-79
295.8
281
47.7
fso43770
Fistulifera solaris
8.1e-78
292.4
376
39.4
CC00G149660
Cyclotella cryptica
1.4e-77
291.6
309
43.7
fso64760
Fistulifera solaris
1.8e-77
291.2
376
39.4
ps00G65070
Pseudo-nitzschia multiseries
3.4e-76
287.0
288
45.8
gene18213
Fragilariopsis cylindrus
4.2e-74
280.0
282
43.6
CC00G122160
Cyclotella cryptica
9.6e-71
268.9
318
42.1
Sro695_g188680
Seminavis robusta
3.6e-70
266.9
263
46.8
CC00G69060
Cyclotella cryptica
1.7e-59
231.5
181
56.4
sya00G00440
Synedra acus
3.7e-54
213.8
186
50.5
ENSG00000163743
Homo sapiens
9.3e-50
199.1
226
38.1
FBgn0031816
Drosophila melanogaster
8.2e-46
186.0
240
37.5
sya00G162130
Synedra acus
7.6e-44
179.5
253
37.5
fso155640
Fistulifera solaris
2.9e-43
177.6
265
37.0
Naga_100090g9
Nannochloropsis gaditana
6.5e-43
176.4
247
36.4
CM13G01410
Cyanidioschyzon merolae
1.2e-41
172.2
246
37.0
Cre05.g248550
Chlamydomonas reinhardtii
2.1e-41
171.4
242
35.5
ccr65580
Chondrus crispus
3.5e-41
170.6
245
35.5
CC00G86210
Cyclotella cryptica
3.9e-40
167.2
278
33.8
AT1G74770
Arabidopsis thaliana
1.1e-39
165.6
242
36.0
AT3G18290
Arabidopsis thaliana
1.1e-39
165.6
322
32.0
Sro9_g007140
Seminavis robusta
6.3e-38
159.8
141
48.2
Cre17.g718300
Chlamydomonas reinhardtii
1.4e-37
158.7
245
33.5
AT1G18910
Arabidopsis thaliana
5.3e-37
156.8
309
29.8
SPAC2F3.16
Schizosaccharomyces pombe
1.5e-36
155.2
245
33.5
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
2.0e-36
154.8
103
70.9
tho328140
Thalassiosira oceanica
7.7e-36
152.9
207
38.6
AT3G62970
Arabidopsis thaliana
2.2e-35
151.4
243
32.9
ps00G05920
Pseudo-nitzschia multiseries
2.2e-35
151.4
250
32.8
ccr36960
Chondrus crispus
6.5e-35
149.8
344
29.7
fso150310
Fistulifera solaris
3.2e-34
147.5
203
37.4
tps146910
Thalassiosira pseudonana
7.2e-34
146.4
226
35.4
Ec-26_004520
Ectocarpus siliculosus
1.6e-33
145.2
265
30.6
Pp3c10_4820
Physcomitrella patens
4.6e-33
143.7
252
30.6
ccr161060
Chondrus crispus
6.1e-33
143.3
324
28.4
Pp3c6_1960
Physcomitrella patens
3.0e-32
141.0
313
28.1
gsu76240
Galdieria sulphuraria
5.1e-32
140.2
246
31.7
Pp3c25_14501
Physcomitrella patens
5.1e-32
140.2
307
28.3
Pp3c25_14500
Physcomitrella patens
5.1e-32
140.2
307
28.3
Pp3c11_6970
Physcomitrella patens
1.1e-31
139.0
271
31.0
Pp3c14_5600
Physcomitrella patens
2.0e-31
138.3
252
28.6
AT5G22920
Arabidopsis thaliana
2.8e-30
134.4
245
29.4
AT5G18650
Arabidopsis thaliana
2.4e-29
131.3
244
28.7
tho87860
Thalassiosira oceanica
1.3e-27
125.6
250
30.4
Pp3c2_31820
Physcomitrella patens
3.8e-27
124.0
245
29.4
pte243060
Paramecium tetraurelia
3.8e-27
124.0
247
29.1
AT5G25560
Arabidopsis thaliana
1.4e-26
122.1
206
32.0
Pp3c1_6070
Physcomitrella patens
1.4e-26
122.1
245
28.6
gene11141
Fragilariopsis cylindrus
4.4e-23
110.5
197
29.9
pte443830
Paramecium tetraurelia
5.7e-23
110.2
246
27.2
pte760660
Paramecium tetraurelia
1.8e-21
105.1
246
26.4
ccr27680
Chondrus crispus
6.3e-14
80.1
204
26.0
Sro345_g122370
Seminavis robusta
2.7e-12
74.7
124
32.3
ccr143140
Chondrus crispus
2.2e-11
71.6
209
28.2
Sro9_g007130
Seminavis robusta
6.1e-09
63.5
53
54.7
CC00G85450
Cyclotella cryptica
2.6e-07
58.2
57
45.6
SPBC17D11.02c
Schizosaccharomyces pombe
4.8e-06
53.9
86
32.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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