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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso77050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso77050
Fistulifera solaris
5.4e-202
704.9
377
100.0
fso191720
Fistulifera solaris
3.3e-199
695.7
377
97.9
fso77080
Fistulifera solaris
2.4e-157
556.6
323
78.0
ptri130290
Phaeodactylum tricornutum
8.1e-150
531.6
320
77.2
fso160310
Fistulifera solaris
5.3e-149
528.9
320
76.6
Sro968_g226070
Seminavis robusta
3.3e-143
509.6
317
74.4
sya00G161050
Synedra acus
5.1e-136
485.7
293
75.4
Sro99_g050950
Seminavis robusta
4.8e-134
479.2
274
78.1
gene16313
Fragilariopsis cylindrus
9.0e-133
474.9
287
74.9
ps00G33510
Pseudo-nitzschia multiseries
3.0e-128
459.9
272
76.1
tps130000
Thalassiosira pseudonana
6.5e-107
389.0
247
68.0
tho217020
Thalassiosira oceanica
9.8e-95
348.6
355
49.6
tps193950
Thalassiosira pseudonana
3.9e-83
310.1
242
58.3
fso199510
Fistulifera solaris
4.3e-82
306.6
312
47.8
tps142420
Thalassiosira pseudonana
1.2e-81
305.1
242
56.6
fso73640
Fistulifera solaris
1.4e-80
301.6
312
47.4
ptri69840
Phaeodactylum tricornutum
5.8e-79
296.2
343
44.0
ptri72160
Phaeodactylum tricornutum
9.8e-79
295.4
362
42.0
sya00G196410
Synedra acus
1.4e-77
291.6
319
46.4
fso43770
Fistulifera solaris
1.6e-76
288.1
377
41.1
fso64760
Fistulifera solaris
1.6e-76
288.1
377
41.1
CC00G149660
Cyclotella cryptica
2.7e-76
287.3
316
44.3
ps00G65070
Pseudo-nitzschia multiseries
1.0e-75
285.4
297
46.8
Sro70_g039030
Seminavis robusta
1.3e-75
285.0
409
38.4
gene18213
Fragilariopsis cylindrus
1.2e-73
278.5
296
45.3
CC00G122160
Cyclotella cryptica
2.6e-71
270.8
351
43.0
Sro695_g188680
Seminavis robusta
5.8e-71
269.6
265
49.1
CC00G69060
Cyclotella cryptica
2.8e-57
224.2
181
56.9
sya00G00440
Synedra acus
2.5e-50
201.1
190
45.8
ENSG00000163743
Homo sapiens
2.6e-47
191.0
228
37.7
CM13G01410
Cyanidioschyzon merolae
8.7e-43
176.0
260
38.5
FBgn0031816
Drosophila melanogaster
1.9e-42
174.9
241
35.3
Cre05.g248550
Chlamydomonas reinhardtii
4.0e-40
167.2
244
37.7
Cre17.g718300
Chlamydomonas reinhardtii
2.9e-38
161.0
247
37.7
SPAC2F3.16
Schizosaccharomyces pombe
5.4e-37
156.8
247
35.6
ccr36960
Chondrus crispus
9.3e-37
156.0
349
31.8
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
9.3e-37
156.0
103
68.0
AT1G74770
Arabidopsis thaliana
1.2e-36
155.6
244
35.2
AT1G18910
Arabidopsis thaliana
6.0e-36
153.3
318
32.7
Pp3c10_4820
Physcomitrella patens
7.9e-36
152.9
246
35.4
AT3G62970
Arabidopsis thaliana
1.3e-35
152.1
245
35.1
ccr65580
Chondrus crispus
1.3e-35
152.1
247
32.4
Ec-26_004520
Ectocarpus siliculosus
3.0e-35
151.0
274
33.9
sya00G162130
Synedra acus
3.9e-35
150.6
262
32.4
Sro9_g007140
Seminavis robusta
5.1e-35
150.2
141
44.7
Naga_100090g9
Nannochloropsis gaditana
6.7e-35
149.8
310
30.0
Pp3c14_5600
Physcomitrella patens
6.7e-35
149.8
250
34.4
fso155640
Fistulifera solaris
3.3e-34
147.5
253
32.8
AT3G18290
Arabidopsis thaliana
4.3e-34
147.1
256
34.0
CC00G86210
Cyclotella cryptica
8.1e-33
142.9
250
30.8
AT5G22920
Arabidopsis thaliana
1.2e-31
139.0
247
32.8
ps00G05920
Pseudo-nitzschia multiseries
1.5e-31
138.7
252
33.7
Pp3c11_6970
Physcomitrella patens
2.6e-31
137.9
284
33.5
AT5G18650
Arabidopsis thaliana
4.5e-31
137.1
246
32.9
ccr161060
Chondrus crispus
7.6e-31
136.3
347
29.7
tho328140
Thalassiosira oceanica
1.0e-30
136.0
300
31.0
Pp3c25_14501
Physcomitrella patens
1.7e-30
135.2
309
31.1
Pp3c25_14500
Physcomitrella patens
1.7e-30
135.2
309
31.1
Pp3c6_1960
Physcomitrella patens
2.9e-30
134.4
310
31.0
gsu76240
Galdieria sulphuraria
4.9e-30
133.7
248
33.9
Pp3c2_31820
Physcomitrella patens
2.5e-29
131.3
247
34.4
Pp3c1_6070
Physcomitrella patens
1.6e-28
128.6
247
33.2
tps146910
Thalassiosira pseudonana
2.1e-28
128.3
212
33.0
pte243060
Paramecium tetraurelia
7.9e-28
126.3
249
32.5
AT5G25560
Arabidopsis thaliana
3.9e-27
124.0
210
34.3
tho87860
Thalassiosira oceanica
5.1e-27
123.6
235
34.5
fso150310
Fistulifera solaris
1.9e-26
121.7
189
32.3
pte443830
Paramecium tetraurelia
6.9e-24
113.2
248
31.5
gene11141
Fragilariopsis cylindrus
2.1e-20
101.7
199
32.7
pte760660
Paramecium tetraurelia
6.1e-20
100.1
248
29.0
ccr143140
Chondrus crispus
1.9e-13
78.6
208
31.7
ccr27680
Chondrus crispus
3.6e-12
74.3
204
25.5
Sro345_g122370
Seminavis robusta
6.7e-11
70.1
112
32.1
Sro9_g007130
Seminavis robusta
2.0e-07
58.5
96
40.6
CC00G85450
Cyclotella cryptica
1.0e-06
56.2
43
55.8
SPBC17D11.02c
Schizosaccharomyces pombe
6.5e-06
53.5
85
32.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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