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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso73010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso73010
Fistulifera solaris
3.0e-224
778.9
392
100.0
fso117070
Fistulifera solaris
2.3e-187
656.4
372
88.7
ptri26240
Phaeodactylum tricornutum
1.2e-92
341.7
355
53.0
Sro23_g016030
Seminavis robusta
7.8e-79
295.8
265
57.7
sya00G81650
Synedra acus
5.8e-66
253.1
290
47.9
gene405
Fragilariopsis cylindrus
5.4e-64
246.5
262
50.0
YDR331W
Saccharomyces cerevisiae strain S288C
3.5e-63
243.8
355
41.1
ps00G117520
Pseudo-nitzschia multiseries
6.6e-62
239.6
268
47.0
tho162340
Thalassiosira oceanica
2.6e-58
227.6
227
51.5
Pp3c9_23730
Physcomitrella patens
4.5e-58
226.9
267
44.9
SPCC11E10.02c
Schizosaccharomyces pombe
3.8e-57
223.8
286
42.7
CC00G96620
Cyclotella cryptica
1.2e-55
218.8
227
48.5
tps187450
Thalassiosira pseudonana
3.5e-55
217.2
226
49.1
AT1G08750
Arabidopsis thaliana
7.4e-53
209.5
250
45.2
Ec-11_001670
Ectocarpus siliculosus
8.1e-52
206.1
219
45.7
FBgn0023545
Drosophila melanogaster
2.4e-51
204.5
305
40.3
WBGene00011482
Caenorhabditis elegans
1.2e-50
202.2
270
39.3
Cre03.g153800
Chlamydomonas reinhardtii
1.7e-49
198.4
271
37.3
ENSG00000142892
Homo sapiens
3.5e-47
190.7
220
45.5
Naga_100171g6
Nannochloropsis gaditana
2.9e-41
171.0
242
38.8
PSNMU-V1.4_AUG-EV-PASAV3_0042360
Pseudo-nitzschia multistriata
6.3e-36
153.3
194
41.8
AA0006G05470
Aureococcus anophagefferens
4.1e-27
124.0
224
32.6
pte653990
Paramecium tetraurelia
1.4e-24
115.5
269
25.7
pte462720
Paramecium tetraurelia
1.9e-24
115.2
273
25.3
WBGene00012144
Caenorhabditis elegans
2.0e-21
105.1
199
29.1
AT3G20210
Arabidopsis thaliana
2.8e-20
101.3
196
27.6
Pp3c8_16430
Physcomitrella patens
4.8e-20
100.5
189
30.2
Pp3c24_12090
Physcomitrella patens
9.1e-19
96.3
196
29.1
Pp3c14_12150
Physcomitrella patens
1.5e-18
95.5
189
30.2
ENSG00000100600
Homo sapiens
2.0e-18
95.1
226
28.3
AT2G25940
Arabidopsis thaliana
5.9e-18
93.6
189
28.6
pte606940
Paramecium tetraurelia
7.7e-18
93.2
190
30.0
Ec-18_001600
Ectocarpus siliculosus
1.0e-17
92.8
209
29.7
pte397850
Paramecium tetraurelia
2.9e-17
91.3
203
30.5
AT4G32940
Arabidopsis thaliana
3.8e-17
90.9
189
28.6
AT1G62710
Arabidopsis thaliana
1.5e-16
89.0
189
28.0
Pp3c20_10970
Physcomitrella patens
8.0e-15
83.2
189
26.5
Cre12.g483550
Chlamydomonas reinhardtii
1.0e-14
82.8
180
26.7
AA0023G00940
Aureococcus anophagefferens
1.1e-13
79.3
188
29.3
Pp3c15_22470
Physcomitrella patens
3.5e-10
67.8
109
35.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing