Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso50510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso50510
Fistulifera solaris
0.0e+00
1232.6
624
100.0
fso108800
Fistulifera solaris
3.8e-261
902.1
529
86.4
ptri90380
Phaeodactylum tricornutum
1.2e-78
295.8
723
33.7
gene7408
Fragilariopsis cylindrus
2.6e-52
208.4
263
44.1
Sro2696_g334910
Seminavis robusta
1.5e-47
192.6
542
33.9
PSNMU-V1.4_AUG-EV-PASAV3_0119170
Pseudo-nitzschia multistriata
1.6e-46
189.1
247
42.5
sya00G02640
Synedra acus
7.9e-41
170.2
238
42.9
emh452110
Emiliania huxleyi
7.6e-36
153.7
222
40.1
ps00G152300
Pseudo-nitzschia multiseries
4.9e-35
151.0
182
45.1
sya00G205920
Synedra acus
9.3e-34
146.7
473
32.3
Pp3c2_30010
Physcomitrella patens
3.5e-33
144.8
253
36.0
ccr54040
Chondrus crispus
7.9e-33
143.7
220
37.3
Pp3c11_6020
Physcomitrella patens
1.0e-32
143.3
251
35.9
Naga_100046g12
Nannochloropsis gaditana
1.3e-32
142.9
248
40.7
Pp3c7_25430
Physcomitrella patens
2.3e-32
142.1
235
37.0
Ec-21_005690
Ectocarpus siliculosus
6.7e-32
140.6
221
36.7
emh156550
Emiliania huxleyi
1.1e-31
139.8
199
41.2
Pp3c1_6880
Physcomitrella patens
2.5e-31
138.7
279
35.5
Cre01.g052300
Chlamydomonas reinhardtii
5.7e-31
137.5
233
37.3
gsu24500
Galdieria sulphuraria
9.7e-31
136.7
293
33.8
AT1G47870
Arabidopsis thaliana
8.2e-30
133.7
220
38.2
AT5G22220
Arabidopsis thaliana
8.2e-30
133.7
240
37.9
ENSG00000205250
Homo sapiens
3.6e-25
118.2
256
36.3
ENSG00000112242
Homo sapiens
3.6e-25
118.2
183
39.3
ENSG00000007968
Homo sapiens
3.0e-24
115.2
242
35.5
ENSG00000133740
Homo sapiens
4.3e-23
111.3
252
34.9
AT2G36010
Arabidopsis thaliana
9.7e-23
110.2
213
34.7
CC00G116100
Cyclotella cryptica
2.2e-22
109.0
249
34.9
AA0005G04260
Aureococcus anophagefferens
5.3e-21
104.4
192
35.9
pte387820
Paramecium tetraurelia
1.5e-20
102.8
214
32.2
FBgn0011766
Drosophila melanogaster
2.6e-20
102.1
178
34.8
pte323260
Paramecium tetraurelia
2.6e-20
102.1
214
32.2
ENSG00000169016
Homo sapiens
1.3e-19
99.8
182
30.2
ENSG00000101412
Homo sapiens
5.0e-19
97.8
231
32.9
tps186270
Thalassiosira pseudonana
3.2e-18
95.1
203
36.9
pte338620
Paramecium tetraurelia
1.6e-17
92.8
202
33.2
pte375490
Paramecium tetraurelia
3.0e-16
88.6
212
32.1
CM20G00670
Cyanidioschyzon merolae
4.8e-14
81.3
271
26.9
ptri229690
Phaeodactylum tricornutum
6.3e-14
80.9
63
54.0
WBGene00001161
Caenorhabditis elegans
9.1e-13
77.0
195
29.2
Sro1799_g298340
Seminavis robusta
5.0e-11
71.2
192
28.6
ptri43450
Phaeodactylum tricornutum
2.1e-09
65.9
90
41.1
FBgn0024371
Drosophila melanogaster
6.1e-09
64.3
95
44.2
ps00G192590
Pseudo-nitzschia multiseries
8.0e-09
63.9
82
39.0
Pp3c22_10160
Physcomitrella patens
2.3e-08
62.4
66
43.9
AT5G14960
Arabidopsis thaliana
3.0e-08
62.0
65
43.1
gene9683
Fragilariopsis cylindrus
3.0e-08
62.0
114
36.0
AT3G01330
Arabidopsis thaliana
3.9e-08
61.6
71
36.6
WBGene00001162
Caenorhabditis elegans
3.9e-08
61.6
64
42.2
PSNMU-V1.4_AUG-EV-PASAV3_0059450
Pseudo-nitzschia multistriata
5.2e-08
61.2
83
37.3
Pp3c21_13480
Physcomitrella patens
5.2e-08
61.2
98
36.7
Sro1798_g298290
Seminavis robusta
5.2e-08
61.2
68
41.2
gsu51740
Galdieria sulphuraria
1.1e-07
60.1
87
43.7
gsu51760
Galdieria sulphuraria
1.1e-07
60.1
87
43.7
AT3G48160
Arabidopsis thaliana
5.7e-07
57.8
84
38.1
ENSG00000165891
Homo sapiens
5.7e-07
57.8
93
36.6
pte765590
Paramecium tetraurelia
7.4e-07
57.4
66
40.9
CM20G04330
Cyanidioschyzon merolae
1.3e-06
56.6
88
38.6
pte743700
Paramecium tetraurelia
1.7e-06
56.2
66
40.9
CC00G184720
Cyclotella cryptica
6.3e-06
54.3
77
33.8
fso57480
Fistulifera solaris
8.2e-06
53.9
237
25.7
fso146010
Fistulifera solaris
8.2e-06
53.9
71
38.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing