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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso33200
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso33200
Fistulifera solaris
0.0e+00
2013.8
1079
100.0
fso136470
Fistulifera solaris
0.0e+00
1864.7
1079
92.8
ptri228950
Phaeodactylum tricornutum
0.0e+00
1093.6
1133
54.2
PSNMU-V1.4_AUG-EV-PASAV3_0081460
Pseudo-nitzschia multistriata
6.1e-299
1028.5
1168
49.3
ps00G192280
Pseudo-nitzschia multiseries
1.1e-287
991.1
1140
48.9
Sro750_g197030
Seminavis robusta
7.2e-284
978.4
1119
48.3
sya00G32010
Synedra acus
9.8e-257
888.3
1156
45.4
gene16973
Fragilariopsis cylindrus
3.4e-241
836.6
776
58.0
tps04010
Thalassiosira pseudonana
3.0e-189
664.1
1342
36.6
CC00G99480
Cyclotella cryptica
2.3e-173
611.3
812
45.4
Ec-20_004140
Ectocarpus siliculosus
5.9e-52
208.0
819
25.6
tho344440
Thalassiosira oceanica
2.0e-44
183.0
282
40.1
ENSG00000160695
Homo sapiens
3.1e-37
159.1
754
24.0
ENSG00000280616
Homo sapiens
3.1e-37
159.1
754
24.0
AT2G05170
Arabidopsis thaliana
9.1e-37
157.5
745
24.8
Pp3c25_5560
Physcomitrella patens
2.2e-22
109.8
381
27.6
Cre02.g095074
Chlamydomonas reinhardtii
3.3e-18
95.9
138
37.0
WBGene00011067
Caenorhabditis elegans
7.0e-13
78.2
131
33.6
SPAC823.12
Schizosaccharomyces pombe
7.8e-12
74.7
246
27.6
pte663880
Paramecium tetraurelia
6.6e-11
71.6
117
32.5
pte754300
Paramecium tetraurelia
6.6e-11
71.6
117
32.5
FBgn0052350
Drosophila melanogaster
1.1e-08
64.3
239
23.4
YMR231W
Saccharomyces cerevisiae strain S288C
4.4e-07
58.9
183
24.0
gsu85630
Galdieria sulphuraria
8.3e-06
54.7
178
27.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing