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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso31390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso31390
Fistulifera solaris
0.0e+00
1186.8
576
100.0
fso118670
Fistulifera solaris
3.6e-298
1025.0
579
85.3
Sro1369_g266930
Seminavis robusta
7.2e-81
303.1
627
35.1
tho22100
Thalassiosira oceanica
2.6e-70
268.1
612
34.3
gene14800
Fragilariopsis cylindrus
3.5e-67
257.7
624
33.2
CC00G46510
Cyclotella cryptica
1.0e-63
246.1
693
31.7
ps00G29420
Pseudo-nitzschia multiseries
3.0e-63
244.6
623
31.8
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
4.2e-57
224.2
645
30.4
sya00G67070
Synedra acus
4.1e-28
127.9
298
34.9
Pp3c10_8190
Physcomitrella patens
4.7e-24
114.4
512
26.4
AT1G11880
Arabidopsis thaliana
1.2e-22
109.8
519
26.4
ENSG00000060642
Homo sapiens
4.9e-21
104.4
527
26.6
Ec-17_003500
Ectocarpus siliculosus
3.5e-19
98.2
586
24.2
FBgn0265174
Drosophila melanogaster
5.2e-15
84.3
470
24.9
Cre07.g320650
Chlamydomonas reinhardtii
2.0e-06
55.8
529
22.5
SPAC18B11.05
Schizosaccharomyces pombe
7.6e-06
53.9
182
29.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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