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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso192580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso192580
Fistulifera solaris
0.0e+00
3395.9
1700
100.0
fso102120
Fistulifera solaris
0.0e+00
3004.5
1700
88.0
ptri10840
Phaeodactylum tricornutum
0.0e+00
1151.0
1859
39.6
PSNMU-V1.4_AUG-EV-PASAV3_0056890
Pseudo-nitzschia multistriata
3.0e-300
1033.5
1839
37.2
Sro182_g079230
Seminavis robusta
1.9e-286
987.6
1952
36.3
gene13206
Fragilariopsis cylindrus
1.7e-255
884.8
844
52.4
ps00G06180
Pseudo-nitzschia multiseries
2.0e-243
844.7
978
47.9
CC00G80650
Cyclotella cryptica
1.0e-215
752.7
1732
33.1
tps06910
Thalassiosira pseudonana
1.2e-205
719.2
1082
41.0
sya00G197860
Synedra acus
5.4e-169
597.4
633
48.3
Pp3c11_19460
Physcomitrella patens
6.7e-143
510.8
1486
29.8
ENSG00000153107
Homo sapiens
1.9e-142
509.2
1081
33.5
AA0026G00290
Aureococcus anophagefferens
2.0e-134
482.6
687
40.8
FBgn0004391
Drosophila melanogaster
9.7e-118
427.2
660
38.0
AT5G05560
Arabidopsis thaliana
1.2e-107
393.7
1088
29.2
Ec-14_001510
Ectocarpus siliculosus
2.0e-107
392.9
702
36.3
ccr66020
Chondrus crispus
4.3e-97
358.6
850
30.8
emh133690
Emiliania huxleyi
2.0e-94
349.7
661
36.0
Cre13.g579100
Chlamydomonas reinhardtii
5.6e-89
331.6
830
29.4
tho350800
Thalassiosira oceanica
5.8e-86
321.6
398
44.2
AA0033G00400
Aureococcus anophagefferens
2.2e-85
319.7
377
46.9
SPBC106.09
Schizosaccharomyces pombe
2.9e-85
319.3
829
29.9
gsu49860
Galdieria sulphuraria
3.7e-85
318.9
826
28.8
pte26530
Paramecium tetraurelia
4.4e-78
295.4
776
28.6
tho586200
Thalassiosira oceanica
2.2e-69
266.5
279
50.9
WBGene00003133
Caenorhabditis elegans
3.9e-58
229.2
699
24.9
sya00G197850
Synedra acus
1.9e-52
210.3
902
25.8
YNL172W
Saccharomyces cerevisiae strain S288C
3.5e-43
179.5
809
24.6
Sro182_g079250
Seminavis robusta
6.7e-34
148.7
120
64.2
CM18G00810
Cyanidioschyzon merolae
1.7e-24
117.5
324
30.9
Naga_100052g39
Nannochloropsis gaditana
5.3e-15
85.9
118
42.4
tho85640
Thalassiosira oceanica
6.5e-13
79.0
148
32.4
emh406700
Emiliania huxleyi
1.6e-06
57.8
153
34.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing