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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso192300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso192300
Fistulifera solaris
0.0e+00
1238.0
604
100.0
fso150710
Fistulifera solaris
4.0e-300
1031.6
608
84.0
ptri33350
Phaeodactylum tricornutum
9.8e-97
355.9
546
39.2
ptri53350
Phaeodactylum tricornutum
7.8e-94
346.3
530
38.1
fso55100
Fistulifera solaris
1.0e-93
345.9
524
38.4
sya00G73700
Synedra acus
1.0e-93
345.9
550
36.7
fso55160
Fistulifera solaris
1.9e-92
341.7
524
38.4
fso05670
Fistulifera solaris
4.7e-91
337.0
517
36.9
fso05610
Fistulifera solaris
6.8e-90
333.2
525
37.9
PSNMU-V1.4_AUG-EV-PASAV3_0005430
Pseudo-nitzschia multistriata
2.3e-82
308.1
634
33.8
gene13284
Fragilariopsis cylindrus
1.6e-67
258.8
466
34.3
Sro93_g048600
Seminavis robusta
2.5e-60
235.0
562
30.4
sya00G136470
Synedra acus
1.4e-55
219.2
415
31.8
sya00G129820
Synedra acus
3.1e-50
201.4
530
28.5
sya00G235620
Synedra acus
2.6e-49
198.4
526
28.9
sya00G231010
Synedra acus
4.5e-49
197.6
526
28.7
ps00G114460
Pseudo-nitzschia multiseries
1.9e-44
182.2
612
27.1
sya00G136490
Synedra acus
5.3e-42
174.1
370
31.6
ptri26850
Phaeodactylum tricornutum
1.5e-41
172.6
245
39.6
sya00G152200
Synedra acus
2.0e-41
172.2
479
28.2
CC00G70050
Cyclotella cryptica
1.7e-40
169.1
520
27.9
Sro1331_g263520
Seminavis robusta
3.5e-38
161.4
372
31.2
ps00G149460
Pseudo-nitzschia multiseries
2.3e-21
105.5
108
44.4
fso100710
Fistulifera solaris
2.6e-12
75.5
66
57.6
Naga_100045g3
Nannochloropsis gaditana
4.4e-12
74.7
265
24.5
Naga_100091g15
Nannochloropsis gaditana
7.4e-12
73.9
244
25.4
fso152090
Fistulifera solaris
4.8e-11
71.2
62
58.1
tps118860
Thalassiosira pseudonana
2.5e-07
58.9
161
31.1
CC00G67180
Cyclotella cryptica
2.7e-06
55.5
160
30.0
tho126280
Thalassiosira oceanica
4.7e-06
54.7
161
31.1
tho487420
Thalassiosira oceanica
6.1e-06
54.3
176
27.8
tho509740
Thalassiosira oceanica
6.1e-06
54.3
151
28.5
CC00G47570
Cyclotella cryptica
8.0e-06
53.9
180
27.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (7 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing