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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso172840
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso172840
Fistulifera solaris
3.2e-309
1061.6
534
100.0
fso60800
Fistulifera solaris
2.4e-272
939.1
533
87.4
ptri180030
Phaeodactylum tricornutum
8.0e-143
508.8
545
48.6
Sro72_g039900
Seminavis robusta
9.8e-117
422.2
570
43.5
sya00G46360
Synedra acus
3.5e-114
413.7
549
43.5
ps00G73630
Pseudo-nitzschia multiseries
8.1e-103
375.9
588
41.0
PSNMU-V1.4_AUG-EV-PASAV3_0035210
Pseudo-nitzschia multistriata
7.6e-101
369.4
625
38.1
tps115140
Thalassiosira pseudonana
5.4e-99
363.2
579
41.3
gene10542
Fragilariopsis cylindrus
3.9e-97
357.1
651
37.6
tho226900
Thalassiosira oceanica
1.4e-83
312.0
604
37.4
Ec-17_001510
Ectocarpus siliculosus
3.4e-69
264.2
567
33.2
ENSG00000258529
Homo sapiens
3.0e-65
251.1
557
33.9
ENSG00000086848
Homo sapiens
8.7e-65
249.6
559
33.3
AT1G16900
Arabidopsis thaliana
3.8e-60
234.2
522
31.4
Naga_100083g12
Nannochloropsis gaditana
1.9e-59
231.9
549
33.0
FBgn0039293
Drosophila melanogaster
2.7e-58
228.0
550
31.1
CC00G91140
Cyclotella cryptica
6.3e-55
216.9
377
36.9
SPAC1834.05
Schizosaccharomyces pombe
4.1e-54
214.2
549
29.3
WBGene00007556
Caenorhabditis elegans
2.9e-52
208.0
564
31.4
Pp3c6_16240
Physcomitrella patens
1.0e-49
199.5
527
29.2
gsu129920
Galdieria sulphuraria
1.1e-48
196.1
580
30.9
emh700160
Emiliania huxleyi
7.4e-48
193.4
567
30.2
CM17G01620
Cyanidioschyzon merolae
2.4e-46
188.3
534
31.8
YNL219C
Saccharomyces cerevisiae strain S288C
6.7e-41
170.2
518
28.8
CC00G169130
Cyclotella cryptica
4.8e-31
137.5
189
44.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing